RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 SPRR2EP22531 72 aa4.91□□□□□ -1.62
SRSF3-201ENST00000339436 SPRR2BP35325 72 aa4.91□□□□□ -1.62
SRSF3-201ENST00000339436 SPRR2AP35326 72 aa4.91□□□□□ -1.62
SRSF3-201ENST00000339436 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
SRSF3-201ENST00000339436 A6NED7 52 aa4.87□□□□□ -1.63
SRSF3-201ENST00000339436 TNP1P09430 55 aa4.86□□□□□ -1.63
SRSF3-201ENST00000339436 K7ERS5 55 aa4.84□□□□□ -1.63
SRSF3-201ENST00000339436 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
SRSF3-201ENST00000339436 MT1EP04732 61 aa4.77□□□□□ -1.65
SRSF3-201ENST00000339436 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
SRSF3-201ENST00000339436 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
SRSF3-201ENST00000339436 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
SRSF3-201ENST00000339436 SPRR2DP22532 72 aa4.74□□□□□ -1.65
SRSF3-201ENST00000339436 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
SRSF3-201ENST00000339436 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
SRSF3-201ENST00000339436 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
SRSF3-201ENST00000339436 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
SRSF3-201ENST00000339436 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
SRSF3-201ENST00000339436 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
SRSF3-201ENST00000339436 MT1LQ93083 61 aa4.6□□□□□ -1.67
SRSF3-201ENST00000339436 MT1GP13640 62 aa4.58□□□□□ -1.68
SRSF3-201ENST00000339436 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SRSF3-201ENST00000339436 ROMO1P60602 79 aa4.56□□□□□ -1.68
SRSF3-201ENST00000339436 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SRSF3-201ENST00000339436 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
SRSF3-201ENST00000339436 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
SRSF3-201ENST00000339436 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
SRSF3-201ENST00000339436 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
SRSF3-201ENST00000339436 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SRSF3-201ENST00000339436 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
SRSF3-201ENST00000339436 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
SRSF3-201ENST00000339436 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
SRSF3-201ENST00000339436 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
SRSF3-201ENST00000339436 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
SRSF3-201ENST00000339436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
SRSF3-201ENST00000339436 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
SRSF3-201ENST00000339436 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SRSF3-201ENST00000339436 MT4P47944 62 aa4.12□□□□□ -1.75
SRSF3-201ENST00000339436 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
SRSF3-201ENST00000339436 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SRSF3-201ENST00000339436 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
SRSF3-201ENST00000339436 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SRSF3-201ENST00000339436 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
SRSF3-201ENST00000339436 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
SRSF3-201ENST00000339436 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
SRSF3-201ENST00000339436 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SRSF3-201ENST00000339436 MT1AP04731 61 aa3.91□□□□□ -1.78
SRSF3-201ENST00000339436 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
SRSF3-201ENST00000339436 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SRSF3-201ENST00000339436 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
SRSF3-201ENST00000339436 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SRSF3-201ENST00000339436 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
SRSF3-201ENST00000339436 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
SRSF3-201ENST00000339436 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.82
SRSF3-201ENST00000339436 MT3P25713 68 aa3.55□□□□□ -1.84
SRSF3-201ENST00000339436 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
SRSF3-201ENST00000339436 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
SRSF3-201ENST00000339436 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SRSF3-201ENST00000339436 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
SRSF3-201ENST00000339436 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SRSF3-201ENST00000339436 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
SRSF3-201ENST00000339436 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
SRSF3-201ENST00000339436 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SRSF3-201ENST00000339436 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SRSF3-201ENST00000339436 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SRSF3-201ENST00000339436 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
SRSF3-201ENST00000339436 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SRSF3-201ENST00000339436 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
SRSF3-201ENST00000339436 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
SRSF3-201ENST00000339436 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SRSF3-201ENST00000339436 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SRSF3-201ENST00000339436 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
SRSF3-201ENST00000339436 PRM1P04553 51 aa2.36□□□□□ -2.03
SRSF3-201ENST00000339436 INE1O15225 51 aa2.34□□□□□ -2.03
SRSF3-201ENST00000339436 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SRSF3-201ENST00000339436 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SRSF3-201ENST00000339436 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
SRSF3-201ENST00000339436 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 140.9 ms