RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
RUNX3-202ENST00000338888 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
RUNX3-202ENST00000338888 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
RUNX3-202ENST00000338888 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
RUNX3-202ENST00000338888 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
RUNX3-202ENST00000338888 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
RUNX3-202ENST00000338888 MT1GP13640 62 aa6.51□□□□□ -1.37
RUNX3-202ENST00000338888 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
RUNX3-202ENST00000338888 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
RUNX3-202ENST00000338888 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
RUNX3-202ENST00000338888 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
RUNX3-202ENST00000338888 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
RUNX3-202ENST00000338888 MT1MQ8N339 61 aa6.28□□□□□ -1.4
RUNX3-202ENST00000338888 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
RUNX3-202ENST00000338888 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
RUNX3-202ENST00000338888 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
RUNX3-202ENST00000338888 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
RUNX3-202ENST00000338888 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
RUNX3-202ENST00000338888 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
RUNX3-202ENST00000338888 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
RUNX3-202ENST00000338888 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
RUNX3-202ENST00000338888 MT1AP04731 61 aa5.93□□□□□ -1.46
RUNX3-202ENST00000338888 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
RUNX3-202ENST00000338888 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
RUNX3-202ENST00000338888 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
RUNX3-202ENST00000338888 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
RUNX3-202ENST00000338888 SPRR2EP22531 72 aa5.87□□□□□ -1.47
RUNX3-202ENST00000338888 SPRR2BP35325 72 aa5.87□□□□□ -1.47
RUNX3-202ENST00000338888 SPRR2AP35326 72 aa5.87□□□□□ -1.47
RUNX3-202ENST00000338888 PRM1P04553 51 aa5.87□□□□□ -1.47
RUNX3-202ENST00000338888 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
RUNX3-202ENST00000338888 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
RUNX3-202ENST00000338888 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
RUNX3-202ENST00000338888 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
RUNX3-202ENST00000338888 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
RUNX3-202ENST00000338888 SPRR2DP22532 72 aa5.63□□□□□ -1.51
RUNX3-202ENST00000338888 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
RUNX3-202ENST00000338888 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
RUNX3-202ENST00000338888 NEBP20929 6669 aa5.38□□□□□ -1.55
RUNX3-202ENST00000338888 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
RUNX3-202ENST00000338888 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
RUNX3-202ENST00000338888 MT3P25713 68 aa5.09□□□□□ -1.6
RUNX3-202ENST00000338888 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
RUNX3-202ENST00000338888 MT4P47944 62 aa5□□□□□ -1.61
RUNX3-202ENST00000338888 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
RUNX3-202ENST00000338888 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
RUNX3-202ENST00000338888 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
RUNX3-202ENST00000338888 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
RUNX3-202ENST00000338888 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
RUNX3-202ENST00000338888 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
RUNX3-202ENST00000338888 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
RUNX3-202ENST00000338888 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
RUNX3-202ENST00000338888 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
RUNX3-202ENST00000338888 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
RUNX3-202ENST00000338888 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
RUNX3-202ENST00000338888 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
RUNX3-202ENST00000338888 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
RUNX3-202ENST00000338888 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
RUNX3-202ENST00000338888 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
RUNX3-202ENST00000338888 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
RUNX3-202ENST00000338888 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
RUNX3-202ENST00000338888 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
RUNX3-202ENST00000338888 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
RUNX3-202ENST00000338888 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
RUNX3-202ENST00000338888 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
RUNX3-202ENST00000338888 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
RUNX3-202ENST00000338888 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
RUNX3-202ENST00000338888 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
RUNX3-202ENST00000338888 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
RUNX3-202ENST00000338888 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
RUNX3-202ENST00000338888 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
RUNX3-202ENST00000338888 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
RUNX3-202ENST00000338888 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
RUNX3-202ENST00000338888 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
RUNX3-202ENST00000338888 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
RUNX3-202ENST00000338888 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
RUNX3-202ENST00000338888 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 64.9 ms