RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
NUDCD3-201ENST00000338427 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
NUDCD3-201ENST00000338427 A0A1B0GU69 56 aa4.71□□□□□ -1.66
NUDCD3-201ENST00000338427 MT4P47944 62 aa4.71□□□□□ -1.66
NUDCD3-201ENST00000338427 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
NUDCD3-201ENST00000338427 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
NUDCD3-201ENST00000338427 LCE4AQ5TA78 99 aa4.66□□□□□ -1.66
NUDCD3-201ENST00000338427 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
NUDCD3-201ENST00000338427 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
NUDCD3-201ENST00000338427 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
NUDCD3-201ENST00000338427 TNP1P09430 55 aa4.62□□□□□ -1.67
NUDCD3-201ENST00000338427 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
NUDCD3-201ENST00000338427 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
NUDCD3-201ENST00000338427 Q1T7F1 81 aa4.58□□□□□ -1.68
NUDCD3-201ENST00000338427 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
NUDCD3-201ENST00000338427 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
NUDCD3-201ENST00000338427 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
NUDCD3-201ENST00000338427 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
NUDCD3-201ENST00000338427 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
NUDCD3-201ENST00000338427 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
NUDCD3-201ENST00000338427 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
NUDCD3-201ENST00000338427 UQCR11O14957 56 aa4.35□□□□□ -1.71
NUDCD3-201ENST00000338427 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
NUDCD3-201ENST00000338427 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
NUDCD3-201ENST00000338427 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
NUDCD3-201ENST00000338427 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
NUDCD3-201ENST00000338427 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
NUDCD3-201ENST00000338427 PSPHP1O15172 72 aa4.32□□□□□ -1.72
NUDCD3-201ENST00000338427 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
NUDCD3-201ENST00000338427 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
NUDCD3-201ENST00000338427 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
NUDCD3-201ENST00000338427 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
NUDCD3-201ENST00000338427 A6NED7 52 aa4.26□□□□□ -1.73
NUDCD3-201ENST00000338427 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
NUDCD3-201ENST00000338427 H3BS24 57 aa4.18□□□□□ -1.74
NUDCD3-201ENST00000338427 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
NUDCD3-201ENST00000338427 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
NUDCD3-201ENST00000338427 K7ERS5 55 aa4.13□□□□□ -1.75
NUDCD3-201ENST00000338427 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
NUDCD3-201ENST00000338427 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
NUDCD3-201ENST00000338427 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
NUDCD3-201ENST00000338427 MT1AP04731 61 aa4.01□□□□□ -1.77
NUDCD3-201ENST00000338427 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
NUDCD3-201ENST00000338427 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
NUDCD3-201ENST00000338427 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
NUDCD3-201ENST00000338427 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
NUDCD3-201ENST00000338427 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
NUDCD3-201ENST00000338427 ROMO1P60602 79 aa3.91□□□□□ -1.78
NUDCD3-201ENST00000338427 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
NUDCD3-201ENST00000338427 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
NUDCD3-201ENST00000338427 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
NUDCD3-201ENST00000338427 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
NUDCD3-201ENST00000338427 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
NUDCD3-201ENST00000338427 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
NUDCD3-201ENST00000338427 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
NUDCD3-201ENST00000338427 MT3P25713 68 aa3.67□□□□□ -1.82
NUDCD3-201ENST00000338427 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
NUDCD3-201ENST00000338427 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
NUDCD3-201ENST00000338427 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
NUDCD3-201ENST00000338427 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NUDCD3-201ENST00000338427 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
NUDCD3-201ENST00000338427 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
NUDCD3-201ENST00000338427 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
NUDCD3-201ENST00000338427 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
NUDCD3-201ENST00000338427 INE1O15225 51 aa3.1□□□□□ -1.91
NUDCD3-201ENST00000338427 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
NUDCD3-201ENST00000338427 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
NUDCD3-201ENST00000338427 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
NUDCD3-201ENST00000338427 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
NUDCD3-201ENST00000338427 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
NUDCD3-201ENST00000338427 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
NUDCD3-201ENST00000338427 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
NUDCD3-201ENST00000338427 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
NUDCD3-201ENST00000338427 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NUDCD3-201ENST00000338427 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
NUDCD3-201ENST00000338427 PRM1P04553 51 aa2.03□□□□□ -2.08
NUDCD3-201ENST00000338427 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
NUDCD3-201ENST00000338427 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms