RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
PRKDC-202ENST00000338368 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
PRKDC-202ENST00000338368 KRTAP19-3Q7Z4W3 81 aa2.1□□□□□ -2.07
PRKDC-202ENST00000338368 LCE2DQ5TA82 110 aaPredicted RBP2.09□□□□□ -2.08
PRKDC-202ENST00000338368 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
PRKDC-202ENST00000338368 LCE3BQ5TA77 95 aa2.04□□□□□ -2.08
PRKDC-202ENST00000338368 MT1MQ8N339 61 aa2.04□□□□□ -2.08
PRKDC-202ENST00000338368 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
PRKDC-202ENST00000338368 KRTAP9-2Q9BYQ4 174 aa2.01□□□□□ -2.09
PRKDC-202ENST00000338368 USH2AO75445 5202 aa2.01□□□□□ -2.09
PRKDC-202ENST00000338368 LCE1AQ5T7P2 110 aa1.99□□□□□ -2.09
PRKDC-202ENST00000338368 LOC100996750A0A140TA64 210 aa1.98□□□□□ -2.09
PRKDC-202ENST00000338368 MT3P25713 68 aa1.97□□□□□ -2.09
PRKDC-202ENST00000338368 KRTAP9-6A0A140TA67 174 aa1.96□□□□□ -2.1
PRKDC-202ENST00000338368 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
PRKDC-202ENST00000338368 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
PRKDC-202ENST00000338368 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
PRKDC-202ENST00000338368 MT4P47944 62 aa1.94□□□□□ -2.1
PRKDC-202ENST00000338368 SYNE2Q8WXH0 6885 aaKnown RBP1.91□□□□□ -2.1
PRKDC-202ENST00000338368 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
PRKDC-202ENST00000338368 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
PRKDC-202ENST00000338368 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.1
PRKDC-202ENST00000338368 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
PRKDC-202ENST00000338368 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
PRKDC-202ENST00000338368 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.11
PRKDC-202ENST00000338368 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
PRKDC-202ENST00000338368 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
PRKDC-202ENST00000338368 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
PRKDC-202ENST00000338368 LCE5AQ5TCM9 118 aa1.87□□□□□ -2.11
PRKDC-202ENST00000338368 MT1AP04731 61 aa1.86□□□□□ -2.11
PRKDC-202ENST00000338368 KRTAP9-7A8MTY7 169 aa1.83□□□□□ -2.12
PRKDC-202ENST00000338368 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
PRKDC-202ENST00000338368 KMT2DO14686 5537 aa1.8□□□□□ -2.12
PRKDC-202ENST00000338368 KRTAP4-9Q9BYQ8 210 aa1.8□□□□□ -2.12
PRKDC-202ENST00000338368 KRTAP2-2Q9BYT5 123 aa1.8□□□□□ -2.12
PRKDC-202ENST00000338368 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
PRKDC-202ENST00000338368 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
PRKDC-202ENST00000338368 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.13
PRKDC-202ENST00000338368 LCE1DQ5T752 114 aa1.77□□□□□ -2.13
PRKDC-202ENST00000338368 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
PRKDC-202ENST00000338368 KRTAP5-9P26371 169 aa1.73□□□□□ -2.13
PRKDC-202ENST00000338368 PRM1P04553 51 aa1.72□□□□□ -2.13
PRKDC-202ENST00000338368 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
PRKDC-202ENST00000338368 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
PRKDC-202ENST00000338368 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
PRKDC-202ENST00000338368 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
PRKDC-202ENST00000338368 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
PRKDC-202ENST00000338368 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
PRKDC-202ENST00000338368 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
PRKDC-202ENST00000338368 NEBP20929 6669 aa1.59□□□□□ -2.15
PRKDC-202ENST00000338368 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
PRKDC-202ENST00000338368 KRTAP4-6Q9BYQ5 205 aa1.54□□□□□ -2.16
PRKDC-202ENST00000338368 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.16
PRKDC-202ENST00000338368 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
PRKDC-202ENST00000338368 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
PRKDC-202ENST00000338368 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
PRKDC-202ENST00000338368 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
PRKDC-202ENST00000338368 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
PRKDC-202ENST00000338368 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
PRKDC-202ENST00000338368 KRTAP4-11Q9BYQ6 195 aa1.31□□□□□ -2.2
PRKDC-202ENST00000338368 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
PRKDC-202ENST00000338368 KRTAP5-3Q6L8H2 238 aa1.27□□□□□ -2.21
PRKDC-202ENST00000338368 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
PRKDC-202ENST00000338368 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
PRKDC-202ENST00000338368 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
PRKDC-202ENST00000338368 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
PRKDC-202ENST00000338368 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
PRKDC-202ENST00000338368 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
PRKDC-202ENST00000338368 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
PRKDC-202ENST00000338368 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
PRKDC-202ENST00000338368 KRTAP5-11Q6L8G4 156 aa1.04□□□□□ -2.24
PRKDC-202ENST00000338368 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.01□□□□□ -2.25
PRKDC-202ENST00000338368 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
PRKDC-202ENST00000338368 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
PRKDC-202ENST00000338368 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
PRKDC-202ENST00000338368 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
PRKDC-202ENST00000338368 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms