RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 KRTAP4-4Q9BYR3 166 aa5.03□□□□□ -1.6
PRIM1-201ENST00000338193 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
PRIM1-201ENST00000338193 A6NED7 52 aa4.96□□□□□ -1.62
PRIM1-201ENST00000338193 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
PRIM1-201ENST00000338193 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
PRIM1-201ENST00000338193 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
PRIM1-201ENST00000338193 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
PRIM1-201ENST00000338193 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
PRIM1-201ENST00000338193 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
PRIM1-201ENST00000338193 K7ERS5 55 aa4.76□□□□□ -1.65
PRIM1-201ENST00000338193 TNP1P09430 55 aa4.75□□□□□ -1.65
PRIM1-201ENST00000338193 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
PRIM1-201ENST00000338193 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
PRIM1-201ENST00000338193 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
PRIM1-201ENST00000338193 NEBP20929 6669 aa4.72□□□□□ -1.65
PRIM1-201ENST00000338193 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
PRIM1-201ENST00000338193 SPRR2EP22531 72 aa4.66□□□□□ -1.66
PRIM1-201ENST00000338193 SPRR2BP35325 72 aa4.66□□□□□ -1.66
PRIM1-201ENST00000338193 SPRR2AP35326 72 aa4.66□□□□□ -1.66
PRIM1-201ENST00000338193 MT1EP04732 61 aa4.65□□□□□ -1.67
PRIM1-201ENST00000338193 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
PRIM1-201ENST00000338193 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
PRIM1-201ENST00000338193 ROMO1P60602 79 aa4.61□□□□□ -1.67
PRIM1-201ENST00000338193 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
PRIM1-201ENST00000338193 MT3P25713 68 aa4.57□□□□□ -1.68
PRIM1-201ENST00000338193 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
PRIM1-201ENST00000338193 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
PRIM1-201ENST00000338193 SPRR2DP22532 72 aa4.5□□□□□ -1.69
PRIM1-201ENST00000338193 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
PRIM1-201ENST00000338193 MT1LQ93083 61 aa4.5□□□□□ -1.69
PRIM1-201ENST00000338193 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
PRIM1-201ENST00000338193 MT1GP13640 62 aa4.4□□□□□ -1.7
PRIM1-201ENST00000338193 MT1MQ8N339 61 aa4.4□□□□□ -1.7
PRIM1-201ENST00000338193 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
PRIM1-201ENST00000338193 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
PRIM1-201ENST00000338193 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
PRIM1-201ENST00000338193 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
PRIM1-201ENST00000338193 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
PRIM1-201ENST00000338193 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
PRIM1-201ENST00000338193 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
PRIM1-201ENST00000338193 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
PRIM1-201ENST00000338193 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
PRIM1-201ENST00000338193 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
PRIM1-201ENST00000338193 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
PRIM1-201ENST00000338193 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
PRIM1-201ENST00000338193 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
PRIM1-201ENST00000338193 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
PRIM1-201ENST00000338193 MT4P47944 62 aa3.94□□□□□ -1.78
PRIM1-201ENST00000338193 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
PRIM1-201ENST00000338193 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
PRIM1-201ENST00000338193 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
PRIM1-201ENST00000338193 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PRIM1-201ENST00000338193 MT1AP04731 61 aa3.8□□□□□ -1.8
PRIM1-201ENST00000338193 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
PRIM1-201ENST00000338193 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
PRIM1-201ENST00000338193 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
PRIM1-201ENST00000338193 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
PRIM1-201ENST00000338193 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
PRIM1-201ENST00000338193 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
PRIM1-201ENST00000338193 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
PRIM1-201ENST00000338193 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
PRIM1-201ENST00000338193 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
PRIM1-201ENST00000338193 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
PRIM1-201ENST00000338193 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
PRIM1-201ENST00000338193 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
PRIM1-201ENST00000338193 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
PRIM1-201ENST00000338193 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
PRIM1-201ENST00000338193 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
PRIM1-201ENST00000338193 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
PRIM1-201ENST00000338193 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
PRIM1-201ENST00000338193 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
PRIM1-201ENST00000338193 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
PRIM1-201ENST00000338193 INE1O15225 51 aa2.42□□□□□ -2.02
PRIM1-201ENST00000338193 PRM1P04553 51 aa2.42□□□□□ -2.02
PRIM1-201ENST00000338193 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PRIM1-201ENST00000338193 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
PRIM1-201ENST00000338193 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms