RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
CDCA4-201ENST00000336219 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
CDCA4-201ENST00000336219 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
CDCA4-201ENST00000336219 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.38
CDCA4-201ENST00000336219 MT1GP13640 62 aa6.44□□□□□ -1.38
CDCA4-201ENST00000336219 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
CDCA4-201ENST00000336219 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
CDCA4-201ENST00000336219 MT1MQ8N339 61 aa6.4□□□□□ -1.38
CDCA4-201ENST00000336219 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.39
CDCA4-201ENST00000336219 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
CDCA4-201ENST00000336219 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
CDCA4-201ENST00000336219 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
CDCA4-201ENST00000336219 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
CDCA4-201ENST00000336219 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
CDCA4-201ENST00000336219 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
CDCA4-201ENST00000336219 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
CDCA4-201ENST00000336219 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
CDCA4-201ENST00000336219 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
CDCA4-201ENST00000336219 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
CDCA4-201ENST00000336219 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
CDCA4-201ENST00000336219 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CDCA4-201ENST00000336219 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
CDCA4-201ENST00000336219 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
CDCA4-201ENST00000336219 MT1AP04731 61 aa5.77□□□□□ -1.49
CDCA4-201ENST00000336219 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
CDCA4-201ENST00000336219 KRTAP5-9P26371 169 aa5.7□□□□□ -1.5
CDCA4-201ENST00000336219 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
CDCA4-201ENST00000336219 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
CDCA4-201ENST00000336219 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
CDCA4-201ENST00000336219 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
CDCA4-201ENST00000336219 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
CDCA4-201ENST00000336219 SPRR2EP22531 72 aa5.56□□□□□ -1.52
CDCA4-201ENST00000336219 SPRR2BP35325 72 aa5.56□□□□□ -1.52
CDCA4-201ENST00000336219 SPRR2AP35326 72 aa5.56□□□□□ -1.52
CDCA4-201ENST00000336219 PRM1P04553 51 aa5.55□□□□□ -1.52
CDCA4-201ENST00000336219 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
CDCA4-201ENST00000336219 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
CDCA4-201ENST00000336219 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.56
CDCA4-201ENST00000336219 SPRR2DP22532 72 aa5.31□□□□□ -1.56
CDCA4-201ENST00000336219 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
CDCA4-201ENST00000336219 NEBP20929 6669 aa5.31□□□□□ -1.56
CDCA4-201ENST00000336219 MT3P25713 68 aa5.17□□□□□ -1.58
CDCA4-201ENST00000336219 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
CDCA4-201ENST00000336219 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
CDCA4-201ENST00000336219 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
CDCA4-201ENST00000336219 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CDCA4-201ENST00000336219 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
CDCA4-201ENST00000336219 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CDCA4-201ENST00000336219 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
CDCA4-201ENST00000336219 MT4P47944 62 aa4.68□□□□□ -1.66
CDCA4-201ENST00000336219 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
CDCA4-201ENST00000336219 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
CDCA4-201ENST00000336219 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
CDCA4-201ENST00000336219 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
CDCA4-201ENST00000336219 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
CDCA4-201ENST00000336219 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
CDCA4-201ENST00000336219 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
CDCA4-201ENST00000336219 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
CDCA4-201ENST00000336219 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
CDCA4-201ENST00000336219 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
CDCA4-201ENST00000336219 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CDCA4-201ENST00000336219 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
CDCA4-201ENST00000336219 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
CDCA4-201ENST00000336219 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
CDCA4-201ENST00000336219 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CDCA4-201ENST00000336219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
CDCA4-201ENST00000336219 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
CDCA4-201ENST00000336219 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CDCA4-201ENST00000336219 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CDCA4-201ENST00000336219 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CDCA4-201ENST00000336219 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CDCA4-201ENST00000336219 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
CDCA4-201ENST00000336219 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
CDCA4-201ENST00000336219 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
CDCA4-201ENST00000336219 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CDCA4-201ENST00000336219 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
CDCA4-201ENST00000336219 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 225.5 ms