RNA–Protein interactions for RNA: ENST00000335626.8

TCF20-201, Transcript of transcription factor 20, humanhuman

TSL 1 (best) BASIC

Gene TCF20, Length 6,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF20-201ENST00000335626 PRM1P04553 51 aa3.35□□□□□ -1.87
TCF20-201ENST00000335626 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
TCF20-201ENST00000335626 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
TCF20-201ENST00000335626 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
TCF20-201ENST00000335626 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
TCF20-201ENST00000335626 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
TCF20-201ENST00000335626 MT1EP04732 61 aa3.28□□□□□ -1.88
TCF20-201ENST00000335626 MT1MQ8N339 61 aa3.18□□□□□ -1.9
TCF20-201ENST00000335626 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
TCF20-201ENST00000335626 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.9
TCF20-201ENST00000335626 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.91
TCF20-201ENST00000335626 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.91
TCF20-201ENST00000335626 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
TCF20-201ENST00000335626 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
TCF20-201ENST00000335626 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
TCF20-201ENST00000335626 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.91
TCF20-201ENST00000335626 MT4P47944 62 aa3.08□□□□□ -1.92
TCF20-201ENST00000335626 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
TCF20-201ENST00000335626 MT1AP04731 61 aa3.07□□□□□ -1.92
TCF20-201ENST00000335626 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
TCF20-201ENST00000335626 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
TCF20-201ENST00000335626 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
TCF20-201ENST00000335626 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
TCF20-201ENST00000335626 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
TCF20-201ENST00000335626 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
TCF20-201ENST00000335626 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
TCF20-201ENST00000335626 MUC2Q02817 5179 aa2.93□□□□□ -1.94
TCF20-201ENST00000335626 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
TCF20-201ENST00000335626 NEBP20929 6669 aa2.85□□□□□ -1.95
TCF20-201ENST00000335626 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
TCF20-201ENST00000335626 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
TCF20-201ENST00000335626 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
TCF20-201ENST00000335626 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
TCF20-201ENST00000335626 LCE1CQ5T751 118 aa2.78□□□□□ -1.97
TCF20-201ENST00000335626 LCE1EQ5T753 118 aa2.78□□□□□ -1.97
TCF20-201ENST00000335626 LCE1FQ5T754 118 aa2.78□□□□□ -1.97
TCF20-201ENST00000335626 USH2AO75445 5202 aa2.76□□□□□ -1.97
TCF20-201ENST00000335626 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
TCF20-201ENST00000335626 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
TCF20-201ENST00000335626 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
TCF20-201ENST00000335626 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
TCF20-201ENST00000335626 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
TCF20-201ENST00000335626 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
TCF20-201ENST00000335626 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
TCF20-201ENST00000335626 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
TCF20-201ENST00000335626 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
TCF20-201ENST00000335626 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
TCF20-201ENST00000335626 KMT2DO14686 5537 aa2.49□□□□□ -2.01
TCF20-201ENST00000335626 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
TCF20-201ENST00000335626 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
TCF20-201ENST00000335626 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
TCF20-201ENST00000335626 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
TCF20-201ENST00000335626 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
TCF20-201ENST00000335626 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
TCF20-201ENST00000335626 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
TCF20-201ENST00000335626 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
TCF20-201ENST00000335626 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
TCF20-201ENST00000335626 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
TCF20-201ENST00000335626 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
TCF20-201ENST00000335626 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TCF20-201ENST00000335626 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
TCF20-201ENST00000335626 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
TCF20-201ENST00000335626 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
TCF20-201ENST00000335626 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
TCF20-201ENST00000335626 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
TCF20-201ENST00000335626 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
TCF20-201ENST00000335626 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
TCF20-201ENST00000335626 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
TCF20-201ENST00000335626 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
TCF20-201ENST00000335626 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
TCF20-201ENST00000335626 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
TCF20-201ENST00000335626 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
TCF20-201ENST00000335626 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
TCF20-201ENST00000335626 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
TCF20-201ENST00000335626 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
TCF20-201ENST00000335626 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
TCF20-201ENST00000335626 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 81.2 ms