RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
RC3H2-201ENST00000335387 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
RC3H2-201ENST00000335387 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
RC3H2-201ENST00000335387 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
RC3H2-201ENST00000335387 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
RC3H2-201ENST00000335387 MT1EP04732 61 aa4.67□□□□□ -1.66
RC3H2-201ENST00000335387 MT1LQ93083 61 aa4.66□□□□□ -1.66
RC3H2-201ENST00000335387 KMT2DO14686 5537 aa4.66□□□□□ -1.66
RC3H2-201ENST00000335387 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
RC3H2-201ENST00000335387 NEBP20929 6669 aa4.53□□□□□ -1.68
RC3H2-201ENST00000335387 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
RC3H2-201ENST00000335387 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
RC3H2-201ENST00000335387 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
RC3H2-201ENST00000335387 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
RC3H2-201ENST00000335387 MT1GP13640 62 aa4.35□□□□□ -1.71
RC3H2-201ENST00000335387 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
RC3H2-201ENST00000335387 MT1MQ8N339 61 aa4.35□□□□□ -1.71
RC3H2-201ENST00000335387 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
RC3H2-201ENST00000335387 SPRR2EP22531 72 aa4.3□□□□□ -1.72
RC3H2-201ENST00000335387 SPRR2BP35325 72 aa4.3□□□□□ -1.72
RC3H2-201ENST00000335387 SPRR2AP35326 72 aa4.3□□□□□ -1.72
RC3H2-201ENST00000335387 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
RC3H2-201ENST00000335387 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
RC3H2-201ENST00000335387 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
RC3H2-201ENST00000335387 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
RC3H2-201ENST00000335387 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
RC3H2-201ENST00000335387 SPRR2DP22532 72 aa4.18□□□□□ -1.74
RC3H2-201ENST00000335387 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
RC3H2-201ENST00000335387 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
RC3H2-201ENST00000335387 MT1AP04731 61 aa4.05□□□□□ -1.76
RC3H2-201ENST00000335387 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
RC3H2-201ENST00000335387 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
RC3H2-201ENST00000335387 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
RC3H2-201ENST00000335387 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
RC3H2-201ENST00000335387 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
RC3H2-201ENST00000335387 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
RC3H2-201ENST00000335387 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
RC3H2-201ENST00000335387 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
RC3H2-201ENST00000335387 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
RC3H2-201ENST00000335387 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
RC3H2-201ENST00000335387 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
RC3H2-201ENST00000335387 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
RC3H2-201ENST00000335387 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
RC3H2-201ENST00000335387 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
RC3H2-201ENST00000335387 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
RC3H2-201ENST00000335387 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
RC3H2-201ENST00000335387 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
RC3H2-201ENST00000335387 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
RC3H2-201ENST00000335387 MT4P47944 62 aa3.51□□□□□ -1.85
RC3H2-201ENST00000335387 MT3P25713 68 aa3.5□□□□□ -1.85
RC3H2-201ENST00000335387 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
RC3H2-201ENST00000335387 PRM1P04553 51 aa3.49□□□□□ -1.85
RC3H2-201ENST00000335387 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
RC3H2-201ENST00000335387 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
RC3H2-201ENST00000335387 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
RC3H2-201ENST00000335387 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
RC3H2-201ENST00000335387 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
RC3H2-201ENST00000335387 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
RC3H2-201ENST00000335387 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
RC3H2-201ENST00000335387 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
RC3H2-201ENST00000335387 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
RC3H2-201ENST00000335387 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
RC3H2-201ENST00000335387 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
RC3H2-201ENST00000335387 LCE1EQ5T753 118 aa3□□□□□ -1.93
RC3H2-201ENST00000335387 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
RC3H2-201ENST00000335387 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
RC3H2-201ENST00000335387 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
RC3H2-201ENST00000335387 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
RC3H2-201ENST00000335387 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
RC3H2-201ENST00000335387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
RC3H2-201ENST00000335387 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
RC3H2-201ENST00000335387 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
RC3H2-201ENST00000335387 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
RC3H2-201ENST00000335387 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
RC3H2-201ENST00000335387 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
RC3H2-201ENST00000335387 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
RC3H2-201ENST00000335387 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 222 ms