RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 MT1LQ93083 61 aa7.05□□□□□ -1.28
SPNS1-203ENST00000334536 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
SPNS1-203ENST00000334536 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
SPNS1-203ENST00000334536 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
SPNS1-203ENST00000334536 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
SPNS1-203ENST00000334536 KRTAP12-4P60329 112 aa6.67□□□□□ -1.34
SPNS1-203ENST00000334536 MT1GP13640 62 aa6.62□□□□□ -1.35
SPNS1-203ENST00000334536 KRTAP19-3Q7Z4W3 81 aa6.61□□□□□ -1.35
SPNS1-203ENST00000334536 MT1MQ8N339 61 aa6.59□□□□□ -1.35
SPNS1-203ENST00000334536 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
SPNS1-203ENST00000334536 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
SPNS1-203ENST00000334536 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
SPNS1-203ENST00000334536 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
SPNS1-203ENST00000334536 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SPNS1-203ENST00000334536 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
SPNS1-203ENST00000334536 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
SPNS1-203ENST00000334536 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
SPNS1-203ENST00000334536 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
SPNS1-203ENST00000334536 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
SPNS1-203ENST00000334536 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
SPNS1-203ENST00000334536 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
SPNS1-203ENST00000334536 MT1AP04731 61 aa6.15□□□□□ -1.43
SPNS1-203ENST00000334536 SPRR2EP22531 72 aa6.13□□□□□ -1.43
SPNS1-203ENST00000334536 SPRR2BP35325 72 aa6.13□□□□□ -1.43
SPNS1-203ENST00000334536 SPRR2AP35326 72 aa6.13□□□□□ -1.43
SPNS1-203ENST00000334536 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
SPNS1-203ENST00000334536 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
SPNS1-203ENST00000334536 PRM1P04553 51 aa6.01□□□□□ -1.45
SPNS1-203ENST00000334536 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
SPNS1-203ENST00000334536 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SPNS1-203ENST00000334536 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
SPNS1-203ENST00000334536 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
SPNS1-203ENST00000334536 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
SPNS1-203ENST00000334536 SPRR2DP22532 72 aa5.91□□□□□ -1.46
SPNS1-203ENST00000334536 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.47
SPNS1-203ENST00000334536 NEBP20929 6669 aa5.83□□□□□ -1.48
SPNS1-203ENST00000334536 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
SPNS1-203ENST00000334536 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
SPNS1-203ENST00000334536 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
SPNS1-203ENST00000334536 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
SPNS1-203ENST00000334536 MT3P25713 68 aa5.37□□□□□ -1.55
SPNS1-203ENST00000334536 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
SPNS1-203ENST00000334536 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
SPNS1-203ENST00000334536 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
SPNS1-203ENST00000334536 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
SPNS1-203ENST00000334536 MT4P47944 62 aa5.16□□□□□ -1.58
SPNS1-203ENST00000334536 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
SPNS1-203ENST00000334536 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
SPNS1-203ENST00000334536 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
SPNS1-203ENST00000334536 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
SPNS1-203ENST00000334536 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
SPNS1-203ENST00000334536 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
SPNS1-203ENST00000334536 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
SPNS1-203ENST00000334536 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
SPNS1-203ENST00000334536 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
SPNS1-203ENST00000334536 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
SPNS1-203ENST00000334536 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SPNS1-203ENST00000334536 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
SPNS1-203ENST00000334536 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
SPNS1-203ENST00000334536 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
SPNS1-203ENST00000334536 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SPNS1-203ENST00000334536 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
SPNS1-203ENST00000334536 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SPNS1-203ENST00000334536 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
SPNS1-203ENST00000334536 KRTAP21-1Q3LI58 79 aa4.01□□□□□ -1.77
SPNS1-203ENST00000334536 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
SPNS1-203ENST00000334536 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
SPNS1-203ENST00000334536 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
SPNS1-203ENST00000334536 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.81
SPNS1-203ENST00000334536 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
SPNS1-203ENST00000334536 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
SPNS1-203ENST00000334536 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
SPNS1-203ENST00000334536 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
SPNS1-203ENST00000334536 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
SPNS1-203ENST00000334536 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
SPNS1-203ENST00000334536 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
SPNS1-203ENST00000334536 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 140.4 ms