RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
PTPRB-202ENST00000334414 KIAA1109Q2LD37 5005 aa1.51□□□□□ -2.17
PTPRB-202ENST00000334414 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
PTPRB-202ENST00000334414 NEBP20929 6669 aa1.5□□□□□ -2.17
PTPRB-202ENST00000334414 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
PTPRB-202ENST00000334414 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
PTPRB-202ENST00000334414 LCE1DQ5T752 114 aa1.49□□□□□ -2.17
PTPRB-202ENST00000334414 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
PTPRB-202ENST00000334414 KMT2DO14686 5537 aa1.47□□□□□ -2.17
PTPRB-202ENST00000334414 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
PTPRB-202ENST00000334414 LOC100996750A0A140TA64 210 aa1.47□□□□□ -2.17
PTPRB-202ENST00000334414 LCE1AQ5T7P2 110 aa1.46□□□□□ -2.18
PTPRB-202ENST00000334414 KRTAP9-4Q9BYQ2 154 aa1.45□□□□□ -2.18
PTPRB-202ENST00000334414 MT4P47944 62 aa1.45□□□□□ -2.18
PTPRB-202ENST00000334414 LCE4AQ5TA78 99 aa1.43□□□□□ -2.18
PTPRB-202ENST00000334414 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
PTPRB-202ENST00000334414 SYNE2Q8WXH0 6885 aaKnown RBP1.41□□□□□ -2.18
PTPRB-202ENST00000334414 KRTAP9-2Q9BYQ4 174 aa1.41□□□□□ -2.18
PTPRB-202ENST00000334414 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.18
PTPRB-202ENST00000334414 LCE2AQ5TA79 106 aaPredicted RBP1.39□□□□□ -2.19
PTPRB-202ENST00000334414 LCE5AQ5TCM9 118 aa1.39□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP2-2Q9BYT5 123 aa1.39□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP17-1Q9BYP8 105 aa1.37□□□□□ -2.19
PTPRB-202ENST00000334414 EPPK1P58107 5090 aaKnown RBP1.37□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
PTPRB-202ENST00000334414 FAT4Q6V0I7 4981 aa1.37□□□□□ -2.19
PTPRB-202ENST00000334414 RNF213Q63HN8 5207 aa1.36□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP9-6A8MVA2 160 aa1.36□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP9-7A8MTY7 169 aa1.35□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP4-9Q9BYQ8 210 aa1.35□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP9-6A0A140TA67 174 aa1.35□□□□□ -2.19
PTPRB-202ENST00000334414 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
PTPRB-202ENST00000334414 LPAP08519 4548 aa1.34□□□□□ -2.19
PTPRB-202ENST00000334414 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.19
PTPRB-202ENST00000334414 MDN1Q9NU22 5596 aa1.34□□□□□ -2.2
PTPRB-202ENST00000334414 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
PTPRB-202ENST00000334414 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
PTPRB-202ENST00000334414 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
PTPRB-202ENST00000334414 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
PTPRB-202ENST00000334414 LCE1EQ5T753 118 aa1.27□□□□□ -2.21
PTPRB-202ENST00000334414 LCE1FQ5T754 118 aa1.27□□□□□ -2.21
PTPRB-202ENST00000334414 KRTAP5-9P26371 169 aa1.21□□□□□ -2.22
PTPRB-202ENST00000334414 KRTAP9-9Q9BYP9 154 aa1.2□□□□□ -2.22
PTPRB-202ENST00000334414 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.18□□□□□ -2.22
PTPRB-202ENST00000334414 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
PTPRB-202ENST00000334414 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
PTPRB-202ENST00000334414 OBSCNQ5VST9 7968 aa1.16□□□□□ -2.22
PTPRB-202ENST00000334414 KRTAP4-11Q9BYQ6 195 aa1.15□□□□□ -2.23
PTPRB-202ENST00000334414 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
PTPRB-202ENST00000334414 MUC2Q02817 5179 aa1.14□□□□□ -2.23
PTPRB-202ENST00000334414 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
PTPRB-202ENST00000334414 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.23
PTPRB-202ENST00000334414 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.23
PTPRB-202ENST00000334414 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
PTPRB-202ENST00000334414 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
PTPRB-202ENST00000334414 USH2AO75445 5202 aa1.07□□□□□ -2.24
PTPRB-202ENST00000334414 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
PTPRB-202ENST00000334414 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
PTPRB-202ENST00000334414 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.24
PTPRB-202ENST00000334414 KRTAP4-6Q9BYQ5 205 aa0.97□□□□□ -2.25
PTPRB-202ENST00000334414 KRTAP5-3Q6L8H2 238 aa0.94□□□□□ -2.26
PTPRB-202ENST00000334414 KRTAP4-4Q9BYR3 166 aa0.92□□□□□ -2.26
PTPRB-202ENST00000334414 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
PTPRB-202ENST00000334414 MUC19Q7Z5P9 8384 aa0.84□□□□□ -2.27
PTPRB-202ENST00000334414 KRTAP4-12Q9BQ66 201 aa0.84□□□□□ -2.27
PTPRB-202ENST00000334414 KRTAP4-2Q9BYR5 136 aa0.84□□□□□ -2.27
PTPRB-202ENST00000334414 KRTAP5-8O75690 187 aa0.83□□□□□ -2.28
PTPRB-202ENST00000334414 KRTAP5-2Q701N4 177 aa0.82□□□□□ -2.28
PTPRB-202ENST00000334414 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
PTPRB-202ENST00000334414 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
PTPRB-202ENST00000334414 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.76□□□□□ -2.29
PTPRB-202ENST00000334414 KRTAP5-1Q6L8H4 278 aa0.73□□□□□ -2.29
PTPRB-202ENST00000334414 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
PTPRB-202ENST00000334414 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
PTPRB-202ENST00000334414 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
PTPRB-202ENST00000334414 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 227.4 ms