RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
HDAC6-201ENST00000334136 SPRR2DP22532 72 aa4.12□□□□□ -1.75
HDAC6-201ENST00000334136 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
HDAC6-201ENST00000334136 MT1GP13640 62 aa4.11□□□□□ -1.75
HDAC6-201ENST00000334136 MT1EP04732 61 aa4.1□□□□□ -1.75
HDAC6-201ENST00000334136 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
HDAC6-201ENST00000334136 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
HDAC6-201ENST00000334136 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
HDAC6-201ENST00000334136 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
HDAC6-201ENST00000334136 KMT2DO14686 5537 aa4.04□□□□□ -1.76
HDAC6-201ENST00000334136 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
HDAC6-201ENST00000334136 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.77
HDAC6-201ENST00000334136 MT1LQ93083 61 aa4.02□□□□□ -1.77
HDAC6-201ENST00000334136 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
HDAC6-201ENST00000334136 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
HDAC6-201ENST00000334136 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
HDAC6-201ENST00000334136 MT1MQ8N339 61 aa3.92□□□□□ -1.78
HDAC6-201ENST00000334136 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
HDAC6-201ENST00000334136 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
HDAC6-201ENST00000334136 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
HDAC6-201ENST00000334136 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
HDAC6-201ENST00000334136 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
HDAC6-201ENST00000334136 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
HDAC6-201ENST00000334136 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
HDAC6-201ENST00000334136 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
HDAC6-201ENST00000334136 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
HDAC6-201ENST00000334136 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
HDAC6-201ENST00000334136 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
HDAC6-201ENST00000334136 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
HDAC6-201ENST00000334136 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
HDAC6-201ENST00000334136 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
HDAC6-201ENST00000334136 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
HDAC6-201ENST00000334136 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
HDAC6-201ENST00000334136 MT4P47944 62 aa3.63□□□□□ -1.83
HDAC6-201ENST00000334136 NEBP20929 6669 aa3.6□□□□□ -1.83
HDAC6-201ENST00000334136 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.84
HDAC6-201ENST00000334136 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
HDAC6-201ENST00000334136 MT1AP04731 61 aa3.5□□□□□ -1.85
HDAC6-201ENST00000334136 PRM1P04553 51 aa3.48□□□□□ -1.85
HDAC6-201ENST00000334136 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
HDAC6-201ENST00000334136 MT3P25713 68 aa3.4□□□□□ -1.87
HDAC6-201ENST00000334136 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
HDAC6-201ENST00000334136 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
HDAC6-201ENST00000334136 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
HDAC6-201ENST00000334136 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
HDAC6-201ENST00000334136 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
HDAC6-201ENST00000334136 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
HDAC6-201ENST00000334136 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
HDAC6-201ENST00000334136 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
HDAC6-201ENST00000334136 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
HDAC6-201ENST00000334136 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
HDAC6-201ENST00000334136 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
HDAC6-201ENST00000334136 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
HDAC6-201ENST00000334136 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
HDAC6-201ENST00000334136 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
HDAC6-201ENST00000334136 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
HDAC6-201ENST00000334136 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
HDAC6-201ENST00000334136 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
HDAC6-201ENST00000334136 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
HDAC6-201ENST00000334136 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
HDAC6-201ENST00000334136 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
HDAC6-201ENST00000334136 KRTAP5-8O75690 187 aa2.54□□□□□ -2
HDAC6-201ENST00000334136 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
HDAC6-201ENST00000334136 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
HDAC6-201ENST00000334136 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
HDAC6-201ENST00000334136 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
HDAC6-201ENST00000334136 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
HDAC6-201ENST00000334136 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
HDAC6-201ENST00000334136 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
HDAC6-201ENST00000334136 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
HDAC6-201ENST00000334136 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
HDAC6-201ENST00000334136 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
HDAC6-201ENST00000334136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
HDAC6-201ENST00000334136 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
HDAC6-201ENST00000334136 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
HDAC6-201ENST00000334136 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
HDAC6-201ENST00000334136 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms