RNA–Protein interactions for RNA: ENST00000333425.10

PIF1-202, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 1 (best) BASIC

Gene PIF1, Length 2,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-202ENST00000333425 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
PIF1-202ENST00000333425 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
PIF1-202ENST00000333425 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
PIF1-202ENST00000333425 INE1O15225 51 aa6.78□□□□□ -1.32
PIF1-202ENST00000333425 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
PIF1-202ENST00000333425 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
PIF1-202ENST00000333425 KRTAP2-3P0C7H8 128 aa6.7□□□□□ -1.34
PIF1-202ENST00000333425 KRTAP2-4Q9BYR9 128 aa6.7□□□□□ -1.34
PIF1-202ENST00000333425 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
PIF1-202ENST00000333425 MT1GP13640 62 aa6.67□□□□□ -1.34
PIF1-202ENST00000333425 MT1MQ8N339 61 aa6.67□□□□□ -1.34
PIF1-202ENST00000333425 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
PIF1-202ENST00000333425 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
PIF1-202ENST00000333425 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
PIF1-202ENST00000333425 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
PIF1-202ENST00000333425 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
PIF1-202ENST00000333425 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
PIF1-202ENST00000333425 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
PIF1-202ENST00000333425 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
PIF1-202ENST00000333425 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
PIF1-202ENST00000333425 SPRR2EP22531 72 aa6.21□□□□□ -1.42
PIF1-202ENST00000333425 SPRR2BP35325 72 aa6.21□□□□□ -1.42
PIF1-202ENST00000333425 SPRR2AP35326 72 aa6.21□□□□□ -1.42
PIF1-202ENST00000333425 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
PIF1-202ENST00000333425 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
PIF1-202ENST00000333425 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.44
PIF1-202ENST00000333425 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
PIF1-202ENST00000333425 SPRR2DP22532 72 aa5.96□□□□□ -1.45
PIF1-202ENST00000333425 MT1AP04731 61 aa5.95□□□□□ -1.46
PIF1-202ENST00000333425 NEBP20929 6669 aa5.93□□□□□ -1.46
PIF1-202ENST00000333425 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
PIF1-202ENST00000333425 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
PIF1-202ENST00000333425 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
PIF1-202ENST00000333425 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
PIF1-202ENST00000333425 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
PIF1-202ENST00000333425 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
PIF1-202ENST00000333425 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
PIF1-202ENST00000333425 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
PIF1-202ENST00000333425 MT3P25713 68 aa5.37□□□□□ -1.55
PIF1-202ENST00000333425 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
PIF1-202ENST00000333425 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
PIF1-202ENST00000333425 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
PIF1-202ENST00000333425 MT4P47944 62 aa5.27□□□□□ -1.57
PIF1-202ENST00000333425 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
PIF1-202ENST00000333425 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
PIF1-202ENST00000333425 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
PIF1-202ENST00000333425 PRM1P04553 51 aa5.16□□□□□ -1.58
PIF1-202ENST00000333425 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
PIF1-202ENST00000333425 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
PIF1-202ENST00000333425 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
PIF1-202ENST00000333425 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
PIF1-202ENST00000333425 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
PIF1-202ENST00000333425 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
PIF1-202ENST00000333425 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
PIF1-202ENST00000333425 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
PIF1-202ENST00000333425 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
PIF1-202ENST00000333425 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
PIF1-202ENST00000333425 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
PIF1-202ENST00000333425 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.73
PIF1-202ENST00000333425 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.73
PIF1-202ENST00000333425 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
PIF1-202ENST00000333425 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
PIF1-202ENST00000333425 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
PIF1-202ENST00000333425 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
PIF1-202ENST00000333425 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
PIF1-202ENST00000333425 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
PIF1-202ENST00000333425 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
PIF1-202ENST00000333425 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
PIF1-202ENST00000333425 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
PIF1-202ENST00000333425 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
PIF1-202ENST00000333425 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PIF1-202ENST00000333425 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
PIF1-202ENST00000333425 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
PIF1-202ENST00000333425 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PIF1-202ENST00000333425 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
PIF1-202ENST00000333425 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
PIF1-202ENST00000333425 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms