RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
MRPL40-201ENST00000333130 KRTAP19-3Q7Z4W3 81 aa7.46□□□□□ -1.21
MRPL40-201ENST00000333130 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
MRPL40-201ENST00000333130 LCE5AQ5TCM9 118 aa7.41□□□□□ -1.22
MRPL40-201ENST00000333130 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
MRPL40-201ENST00000333130 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
MRPL40-201ENST00000333130 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
MRPL40-201ENST00000333130 MT1GP13640 62 aa7.35□□□□□ -1.23
MRPL40-201ENST00000333130 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
MRPL40-201ENST00000333130 MT1LQ93083 61 aa7.32□□□□□ -1.24
MRPL40-201ENST00000333130 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
MRPL40-201ENST00000333130 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
MRPL40-201ENST00000333130 MT1MQ8N339 61 aa7.2□□□□□ -1.26
MRPL40-201ENST00000333130 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
MRPL40-201ENST00000333130 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
MRPL40-201ENST00000333130 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
MRPL40-201ENST00000333130 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
MRPL40-201ENST00000333130 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
MRPL40-201ENST00000333130 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
MRPL40-201ENST00000333130 LCE3CQ5T5A8 94 aa6.83□□□□□ -1.32
MRPL40-201ENST00000333130 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
MRPL40-201ENST00000333130 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
MRPL40-201ENST00000333130 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
MRPL40-201ENST00000333130 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
MRPL40-201ENST00000333130 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
MRPL40-201ENST00000333130 GPR98Q8WXG9 6306 aa6.6□□□□□ -1.35
MRPL40-201ENST00000333130 MT4P47944 62 aa6.58□□□□□ -1.36
MRPL40-201ENST00000333130 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
MRPL40-201ENST00000333130 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
MRPL40-201ENST00000333130 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
MRPL40-201ENST00000333130 KRTAP9-6A8MVA2 160 aa6.46□□□□□ -1.37
MRPL40-201ENST00000333130 HMCN1Q96RW7 5635 aa6.44□□□□□ -1.38
MRPL40-201ENST00000333130 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
MRPL40-201ENST00000333130 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
MRPL40-201ENST00000333130 H3BS24 57 aa6.34□□□□□ -1.39
MRPL40-201ENST00000333130 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
MRPL40-201ENST00000333130 MT1AP04731 61 aa6.24□□□□□ -1.41
MRPL40-201ENST00000333130 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
MRPL40-201ENST00000333130 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
MRPL40-201ENST00000333130 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
MRPL40-201ENST00000333130 AHNAK2Q8IVF2 5795 aa6.11□□□□□ -1.43
MRPL40-201ENST00000333130 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
MRPL40-201ENST00000333130 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
MRPL40-201ENST00000333130 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
MRPL40-201ENST00000333130 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
MRPL40-201ENST00000333130 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
MRPL40-201ENST00000333130 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
MRPL40-201ENST00000333130 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
MRPL40-201ENST00000333130 MT3P25713 68 aa5.73□□□□□ -1.49
MRPL40-201ENST00000333130 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
MRPL40-201ENST00000333130 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
MRPL40-201ENST00000333130 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
MRPL40-201ENST00000333130 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
MRPL40-201ENST00000333130 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
MRPL40-201ENST00000333130 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
MRPL40-201ENST00000333130 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
MRPL40-201ENST00000333130 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
MRPL40-201ENST00000333130 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
MRPL40-201ENST00000333130 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
MRPL40-201ENST00000333130 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
MRPL40-201ENST00000333130 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
MRPL40-201ENST00000333130 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
MRPL40-201ENST00000333130 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
MRPL40-201ENST00000333130 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
MRPL40-201ENST00000333130 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
MRPL40-201ENST00000333130 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
MRPL40-201ENST00000333130 INE1O15225 51 aa4.43□□□□□ -1.7
MRPL40-201ENST00000333130 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
MRPL40-201ENST00000333130 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
MRPL40-201ENST00000333130 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
MRPL40-201ENST00000333130 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
MRPL40-201ENST00000333130 PRM1P04553 51 aa3.89□□□□□ -1.79
MRPL40-201ENST00000333130 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
MRPL40-201ENST00000333130 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
MRPL40-201ENST00000333130 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
MRPL40-201ENST00000333130 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
MRPL40-201ENST00000333130 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms