RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
TUBA1B-201ENST00000332858 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
TUBA1B-201ENST00000332858 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
TUBA1B-201ENST00000332858 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
TUBA1B-201ENST00000332858 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
TUBA1B-201ENST00000332858 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
TUBA1B-201ENST00000332858 MT1GP13640 62 aa4.4□□□□□ -1.71
TUBA1B-201ENST00000332858 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
TUBA1B-201ENST00000332858 MT1MQ8N339 61 aa4.36□□□□□ -1.71
TUBA1B-201ENST00000332858 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
TUBA1B-201ENST00000332858 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
TUBA1B-201ENST00000332858 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
TUBA1B-201ENST00000332858 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
TUBA1B-201ENST00000332858 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
TUBA1B-201ENST00000332858 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
TUBA1B-201ENST00000332858 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
TUBA1B-201ENST00000332858 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
TUBA1B-201ENST00000332858 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
TUBA1B-201ENST00000332858 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
TUBA1B-201ENST00000332858 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
TUBA1B-201ENST00000332858 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
TUBA1B-201ENST00000332858 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
TUBA1B-201ENST00000332858 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
TUBA1B-201ENST00000332858 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
TUBA1B-201ENST00000332858 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TUBA1B-201ENST00000332858 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
TUBA1B-201ENST00000332858 MT3P25713 68 aa4.04□□□□□ -1.76
TUBA1B-201ENST00000332858 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
TUBA1B-201ENST00000332858 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
TUBA1B-201ENST00000332858 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
TUBA1B-201ENST00000332858 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
TUBA1B-201ENST00000332858 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
TUBA1B-201ENST00000332858 MT1AP04731 61 aa3.87□□□□□ -1.79
TUBA1B-201ENST00000332858 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
TUBA1B-201ENST00000332858 SPRR2EP22531 72 aa3.83□□□□□ -1.8
TUBA1B-201ENST00000332858 SPRR2BP35325 72 aa3.83□□□□□ -1.8
TUBA1B-201ENST00000332858 SPRR2AP35326 72 aa3.83□□□□□ -1.8
TUBA1B-201ENST00000332858 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
TUBA1B-201ENST00000332858 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
TUBA1B-201ENST00000332858 SPRR2DP22532 72 aa3.65□□□□□ -1.82
TUBA1B-201ENST00000332858 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
TUBA1B-201ENST00000332858 PRM1P04553 51 aa3.57□□□□□ -1.84
TUBA1B-201ENST00000332858 NEBP20929 6669 aa3.41□□□□□ -1.86
TUBA1B-201ENST00000332858 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
TUBA1B-201ENST00000332858 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
TUBA1B-201ENST00000332858 MT4P47944 62 aa3.31□□□□□ -1.88
TUBA1B-201ENST00000332858 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
TUBA1B-201ENST00000332858 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
TUBA1B-201ENST00000332858 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
TUBA1B-201ENST00000332858 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TUBA1B-201ENST00000332858 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
TUBA1B-201ENST00000332858 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
TUBA1B-201ENST00000332858 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
TUBA1B-201ENST00000332858 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
TUBA1B-201ENST00000332858 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
TUBA1B-201ENST00000332858 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TUBA1B-201ENST00000332858 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
TUBA1B-201ENST00000332858 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
TUBA1B-201ENST00000332858 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
TUBA1B-201ENST00000332858 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
TUBA1B-201ENST00000332858 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
TUBA1B-201ENST00000332858 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -2
TUBA1B-201ENST00000332858 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
TUBA1B-201ENST00000332858 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
TUBA1B-201ENST00000332858 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
TUBA1B-201ENST00000332858 KRTAP5-8O75690 187 aa2.53□□□□□ -2
TUBA1B-201ENST00000332858 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
TUBA1B-201ENST00000332858 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
TUBA1B-201ENST00000332858 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
TUBA1B-201ENST00000332858 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
TUBA1B-201ENST00000332858 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
TUBA1B-201ENST00000332858 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
TUBA1B-201ENST00000332858 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 113.7 ms