RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
PKP3-201ENST00000331563 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
PKP3-201ENST00000331563 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
PKP3-201ENST00000331563 MT1EP04732 61 aa6.02□□□□□ -1.45
PKP3-201ENST00000331563 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
PKP3-201ENST00000331563 MT1LQ93083 61 aa5.98□□□□□ -1.45
PKP3-201ENST00000331563 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
PKP3-201ENST00000331563 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
PKP3-201ENST00000331563 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
PKP3-201ENST00000331563 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
PKP3-201ENST00000331563 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PKP3-201ENST00000331563 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
PKP3-201ENST00000331563 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
PKP3-201ENST00000331563 MT1GP13640 62 aa5.75□□□□□ -1.49
PKP3-201ENST00000331563 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
PKP3-201ENST00000331563 MT1MQ8N339 61 aa5.66□□□□□ -1.5
PKP3-201ENST00000331563 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
PKP3-201ENST00000331563 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
PKP3-201ENST00000331563 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
PKP3-201ENST00000331563 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
PKP3-201ENST00000331563 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
PKP3-201ENST00000331563 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
PKP3-201ENST00000331563 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
PKP3-201ENST00000331563 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
PKP3-201ENST00000331563 SPRR2EP22531 72 aa5.38□□□□□ -1.55
PKP3-201ENST00000331563 SPRR2BP35325 72 aa5.38□□□□□ -1.55
PKP3-201ENST00000331563 SPRR2AP35326 72 aa5.38□□□□□ -1.55
PKP3-201ENST00000331563 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
PKP3-201ENST00000331563 PRM1P04553 51 aa5.36□□□□□ -1.55
PKP3-201ENST00000331563 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
PKP3-201ENST00000331563 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
PKP3-201ENST00000331563 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
PKP3-201ENST00000331563 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
PKP3-201ENST00000331563 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PKP3-201ENST00000331563 MT1AP04731 61 aa5.24□□□□□ -1.57
PKP3-201ENST00000331563 SPRR2DP22532 72 aa5.15□□□□□ -1.58
PKP3-201ENST00000331563 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
PKP3-201ENST00000331563 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
PKP3-201ENST00000331563 NEBP20929 6669 aa5.04□□□□□ -1.6
PKP3-201ENST00000331563 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
PKP3-201ENST00000331563 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
PKP3-201ENST00000331563 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
PKP3-201ENST00000331563 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
PKP3-201ENST00000331563 MT4P47944 62 aa4.64□□□□□ -1.67
PKP3-201ENST00000331563 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
PKP3-201ENST00000331563 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
PKP3-201ENST00000331563 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
PKP3-201ENST00000331563 MT3P25713 68 aa4.49□□□□□ -1.69
PKP3-201ENST00000331563 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
PKP3-201ENST00000331563 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
PKP3-201ENST00000331563 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
PKP3-201ENST00000331563 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
PKP3-201ENST00000331563 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
PKP3-201ENST00000331563 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
PKP3-201ENST00000331563 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
PKP3-201ENST00000331563 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
PKP3-201ENST00000331563 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
PKP3-201ENST00000331563 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
PKP3-201ENST00000331563 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
PKP3-201ENST00000331563 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PKP3-201ENST00000331563 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PKP3-201ENST00000331563 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
PKP3-201ENST00000331563 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
PKP3-201ENST00000331563 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
PKP3-201ENST00000331563 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
PKP3-201ENST00000331563 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
PKP3-201ENST00000331563 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
PKP3-201ENST00000331563 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.88
PKP3-201ENST00000331563 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
PKP3-201ENST00000331563 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
PKP3-201ENST00000331563 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
PKP3-201ENST00000331563 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
PKP3-201ENST00000331563 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
PKP3-201ENST00000331563 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
PKP3-201ENST00000331563 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
PKP3-201ENST00000331563 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
PKP3-201ENST00000331563 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 48.4 ms