RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
RIPPLY3-201ENST00000329553 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
RIPPLY3-201ENST00000329553 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
RIPPLY3-201ENST00000329553 INE1O15225 51 aa7.03□□□□□ -1.28
RIPPLY3-201ENST00000329553 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
RIPPLY3-201ENST00000329553 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
RIPPLY3-201ENST00000329553 MT1GP13640 62 aa6.92□□□□□ -1.3
RIPPLY3-201ENST00000329553 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
RIPPLY3-201ENST00000329553 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
RIPPLY3-201ENST00000329553 MT1MQ8N339 61 aa6.86□□□□□ -1.31
RIPPLY3-201ENST00000329553 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
RIPPLY3-201ENST00000329553 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
RIPPLY3-201ENST00000329553 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
RIPPLY3-201ENST00000329553 MDN1Q9NU22 5596 aa6.76□□□□□ -1.33
RIPPLY3-201ENST00000329553 LCE1AQ5T7P2 110 aa6.73□□□□□ -1.33
RIPPLY3-201ENST00000329553 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
RIPPLY3-201ENST00000329553 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
RIPPLY3-201ENST00000329553 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
RIPPLY3-201ENST00000329553 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
RIPPLY3-201ENST00000329553 SPRR2EP22531 72 aa6.65□□□□□ -1.35
RIPPLY3-201ENST00000329553 SPRR2BP35325 72 aa6.65□□□□□ -1.35
RIPPLY3-201ENST00000329553 SPRR2AP35326 72 aa6.65□□□□□ -1.35
RIPPLY3-201ENST00000329553 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
RIPPLY3-201ENST00000329553 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
RIPPLY3-201ENST00000329553 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.39
RIPPLY3-201ENST00000329553 SPRR2DP22532 72 aa6.38□□□□□ -1.39
RIPPLY3-201ENST00000329553 NEBP20929 6669 aa6.25□□□□□ -1.41
RIPPLY3-201ENST00000329553 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
RIPPLY3-201ENST00000329553 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
RIPPLY3-201ENST00000329553 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
RIPPLY3-201ENST00000329553 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
RIPPLY3-201ENST00000329553 MT1AP04731 61 aa6.07□□□□□ -1.44
RIPPLY3-201ENST00000329553 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
RIPPLY3-201ENST00000329553 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
RIPPLY3-201ENST00000329553 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
RIPPLY3-201ENST00000329553 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
RIPPLY3-201ENST00000329553 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.49
RIPPLY3-201ENST00000329553 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
RIPPLY3-201ENST00000329553 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
RIPPLY3-201ENST00000329553 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
RIPPLY3-201ENST00000329553 MT4P47944 62 aa5.58□□□□□ -1.52
RIPPLY3-201ENST00000329553 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
RIPPLY3-201ENST00000329553 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
RIPPLY3-201ENST00000329553 MT3P25713 68 aa5.5□□□□□ -1.53
RIPPLY3-201ENST00000329553 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
RIPPLY3-201ENST00000329553 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
RIPPLY3-201ENST00000329553 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
RIPPLY3-201ENST00000329553 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
RIPPLY3-201ENST00000329553 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
RIPPLY3-201ENST00000329553 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
RIPPLY3-201ENST00000329553 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
RIPPLY3-201ENST00000329553 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
RIPPLY3-201ENST00000329553 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
RIPPLY3-201ENST00000329553 PRM1P04553 51 aa5.16□□□□□ -1.58
RIPPLY3-201ENST00000329553 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
RIPPLY3-201ENST00000329553 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
RIPPLY3-201ENST00000329553 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
RIPPLY3-201ENST00000329553 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
RIPPLY3-201ENST00000329553 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
RIPPLY3-201ENST00000329553 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
RIPPLY3-201ENST00000329553 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
RIPPLY3-201ENST00000329553 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
RIPPLY3-201ENST00000329553 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
RIPPLY3-201ENST00000329553 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
RIPPLY3-201ENST00000329553 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
RIPPLY3-201ENST00000329553 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
RIPPLY3-201ENST00000329553 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
RIPPLY3-201ENST00000329553 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
RIPPLY3-201ENST00000329553 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
RIPPLY3-201ENST00000329553 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
RIPPLY3-201ENST00000329553 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
RIPPLY3-201ENST00000329553 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
RIPPLY3-201ENST00000329553 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
RIPPLY3-201ENST00000329553 PHGR1C9JFL3 82 aa3.34□□□□□ -1.88
RIPPLY3-201ENST00000329553 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
RIPPLY3-201ENST00000329553 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
RIPPLY3-201ENST00000329553 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 107.7 ms