RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
FRAS1-201ENST00000325942 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
FRAS1-201ENST00000325942 MT3P25713 68 aa2.98□□□□□ -1.93
FRAS1-201ENST00000325942 HYDINQ4G0P3 5121 aa2.96□□□□□ -1.93
FRAS1-201ENST00000325942 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
FRAS1-201ENST00000325942 MT1LQ93083 61 aa2.91□□□□□ -1.94
FRAS1-201ENST00000325942 MT1EP04732 61 aa2.89□□□□□ -1.95
FRAS1-201ENST00000325942 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
FRAS1-201ENST00000325942 MT1MQ8N339 61 aa2.88□□□□□ -1.95
FRAS1-201ENST00000325942 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
FRAS1-201ENST00000325942 LRP2P98164 4655 aa2.81□□□□□ -1.96
FRAS1-201ENST00000325942 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
FRAS1-201ENST00000325942 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
FRAS1-201ENST00000325942 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
FRAS1-201ENST00000325942 HERC2O95714 4834 aa2.77□□□□□ -1.97
FRAS1-201ENST00000325942 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
FRAS1-201ENST00000325942 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
FRAS1-201ENST00000325942 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.97
FRAS1-201ENST00000325942 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
FRAS1-201ENST00000325942 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
FRAS1-201ENST00000325942 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
FRAS1-201ENST00000325942 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
FRAS1-201ENST00000325942 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
FRAS1-201ENST00000325942 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
FRAS1-201ENST00000325942 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
FRAS1-201ENST00000325942 EPPK1P58107 5090 aaKnown RBP2.65□□□□□ -1.99
FRAS1-201ENST00000325942 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
FRAS1-201ENST00000325942 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
FRAS1-201ENST00000325942 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
FRAS1-201ENST00000325942 MT1AP04731 61 aa2.56□□□□□ -2
FRAS1-201ENST00000325942 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
FRAS1-201ENST00000325942 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
FRAS1-201ENST00000325942 MUC2Q02817 5179 aa2.49□□□□□ -2.01
FRAS1-201ENST00000325942 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
FRAS1-201ENST00000325942 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
FRAS1-201ENST00000325942 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
FRAS1-201ENST00000325942 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
FRAS1-201ENST00000325942 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
FRAS1-201ENST00000325942 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
FRAS1-201ENST00000325942 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
FRAS1-201ENST00000325942 RNF213Q63HN8 5207 aa2.4□□□□□ -2.02
FRAS1-201ENST00000325942 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
FRAS1-201ENST00000325942 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
FRAS1-201ENST00000325942 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
FRAS1-201ENST00000325942 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
FRAS1-201ENST00000325942 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
FRAS1-201ENST00000325942 KMT2DO14686 5537 aa2.29□□□□□ -2.04
FRAS1-201ENST00000325942 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
FRAS1-201ENST00000325942 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
FRAS1-201ENST00000325942 USH2AO75445 5202 aa2.12□□□□□ -2.07
FRAS1-201ENST00000325942 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
FRAS1-201ENST00000325942 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
FRAS1-201ENST00000325942 NEBP20929 6669 aa2.02□□□□□ -2.09
FRAS1-201ENST00000325942 KRTAP5-9P26371 169 aa2□□□□□ -2.09
FRAS1-201ENST00000325942 MUC12Q9UKN1 5478 aa1.93□□□□□ -2.1
FRAS1-201ENST00000325942 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
FRAS1-201ENST00000325942 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
FRAS1-201ENST00000325942 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
FRAS1-201ENST00000325942 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
FRAS1-201ENST00000325942 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
FRAS1-201ENST00000325942 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.13
FRAS1-201ENST00000325942 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
FRAS1-201ENST00000325942 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
FRAS1-201ENST00000325942 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
FRAS1-201ENST00000325942 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
FRAS1-201ENST00000325942 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
FRAS1-201ENST00000325942 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
FRAS1-201ENST00000325942 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
FRAS1-201ENST00000325942 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
FRAS1-201ENST00000325942 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
FRAS1-201ENST00000325942 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
FRAS1-201ENST00000325942 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
FRAS1-201ENST00000325942 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
FRAS1-201ENST00000325942 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
FRAS1-201ENST00000325942 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
FRAS1-201ENST00000325942 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
FRAS1-201ENST00000325942 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 66.3 ms