RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
SYNE4-201ENST00000324444 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
SYNE4-201ENST00000324444 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
SYNE4-201ENST00000324444 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
SYNE4-201ENST00000324444 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
SYNE4-201ENST00000324444 SPRR2DP22532 72 aa6.69□□□□□ -1.34
SYNE4-201ENST00000324444 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.35
SYNE4-201ENST00000324444 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
SYNE4-201ENST00000324444 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
SYNE4-201ENST00000324444 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
SYNE4-201ENST00000324444 MT1EP04732 61 aa6.57□□□□□ -1.36
SYNE4-201ENST00000324444 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
SYNE4-201ENST00000324444 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
SYNE4-201ENST00000324444 MT1LQ93083 61 aa6.41□□□□□ -1.38
SYNE4-201ENST00000324444 KRTAP19-3Q7Z4W3 81 aa6.37□□□□□ -1.39
SYNE4-201ENST00000324444 MT1GP13640 62 aa6.35□□□□□ -1.39
SYNE4-201ENST00000324444 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
SYNE4-201ENST00000324444 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
SYNE4-201ENST00000324444 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
SYNE4-201ENST00000324444 MT1MQ8N339 61 aa6.18□□□□□ -1.42
SYNE4-201ENST00000324444 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
SYNE4-201ENST00000324444 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
SYNE4-201ENST00000324444 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
SYNE4-201ENST00000324444 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
SYNE4-201ENST00000324444 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
SYNE4-201ENST00000324444 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
SYNE4-201ENST00000324444 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
SYNE4-201ENST00000324444 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
SYNE4-201ENST00000324444 MT4P47944 62 aa5.85□□□□□ -1.47
SYNE4-201ENST00000324444 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
SYNE4-201ENST00000324444 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
SYNE4-201ENST00000324444 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
SYNE4-201ENST00000324444 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
SYNE4-201ENST00000324444 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
SYNE4-201ENST00000324444 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.51
SYNE4-201ENST00000324444 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
SYNE4-201ENST00000324444 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
SYNE4-201ENST00000324444 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
SYNE4-201ENST00000324444 MT1AP04731 61 aa5.49□□□□□ -1.53
SYNE4-201ENST00000324444 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
SYNE4-201ENST00000324444 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SYNE4-201ENST00000324444 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SYNE4-201ENST00000324444 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
SYNE4-201ENST00000324444 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
SYNE4-201ENST00000324444 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
SYNE4-201ENST00000324444 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
SYNE4-201ENST00000324444 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
SYNE4-201ENST00000324444 MT3P25713 68 aa5.04□□□□□ -1.6
SYNE4-201ENST00000324444 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
SYNE4-201ENST00000324444 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
SYNE4-201ENST00000324444 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SYNE4-201ENST00000324444 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
SYNE4-201ENST00000324444 INE1O15225 51 aa4.76□□□□□ -1.65
SYNE4-201ENST00000324444 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
SYNE4-201ENST00000324444 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
SYNE4-201ENST00000324444 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
SYNE4-201ENST00000324444 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SYNE4-201ENST00000324444 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
SYNE4-201ENST00000324444 H3BS24 57 aa4.6□□□□□ -1.67
SYNE4-201ENST00000324444 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
SYNE4-201ENST00000324444 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
SYNE4-201ENST00000324444 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
SYNE4-201ENST00000324444 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
SYNE4-201ENST00000324444 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SYNE4-201ENST00000324444 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SYNE4-201ENST00000324444 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
SYNE4-201ENST00000324444 PRM1P04553 51 aa3.86□□□□□ -1.79
SYNE4-201ENST00000324444 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
SYNE4-201ENST00000324444 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
SYNE4-201ENST00000324444 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
SYNE4-201ENST00000324444 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
SYNE4-201ENST00000324444 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
SYNE4-201ENST00000324444 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SYNE4-201ENST00000324444 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
SYNE4-201ENST00000324444 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
SYNE4-201ENST00000324444 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SYNE4-201ENST00000324444 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms