RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PRM1P04553 51 aa3.3□□□□□ -1.88
SNRNP200-201ENST00000323853 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
SNRNP200-201ENST00000323853 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
SNRNP200-201ENST00000323853 MT4P47944 62 aa3.25□□□□□ -1.89
SNRNP200-201ENST00000323853 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
SNRNP200-201ENST00000323853 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
SNRNP200-201ENST00000323853 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
SNRNP200-201ENST00000323853 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
SNRNP200-201ENST00000323853 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
SNRNP200-201ENST00000323853 MT1AP04731 61 aa3.18□□□□□ -1.9
SNRNP200-201ENST00000323853 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
SNRNP200-201ENST00000323853 ABCA13Q86UQ4 5058 aa3.15□□□□□ -1.91
SNRNP200-201ENST00000323853 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
SNRNP200-201ENST00000323853 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
SNRNP200-201ENST00000323853 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
SNRNP200-201ENST00000323853 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
SNRNP200-201ENST00000323853 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
SNRNP200-201ENST00000323853 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
SNRNP200-201ENST00000323853 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
SNRNP200-201ENST00000323853 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SNRNP200-201ENST00000323853 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
SNRNP200-201ENST00000323853 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
SNRNP200-201ENST00000323853 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SNRNP200-201ENST00000323853 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
SNRNP200-201ENST00000323853 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
SNRNP200-201ENST00000323853 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
SNRNP200-201ENST00000323853 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
SNRNP200-201ENST00000323853 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
SNRNP200-201ENST00000323853 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
SNRNP200-201ENST00000323853 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.96
SNRNP200-201ENST00000323853 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
SNRNP200-201ENST00000323853 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SNRNP200-201ENST00000323853 MUC2Q02817 5179 aa2.65□□□□□ -1.99
SNRNP200-201ENST00000323853 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
SNRNP200-201ENST00000323853 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SNRNP200-201ENST00000323853 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
SNRNP200-201ENST00000323853 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SNRNP200-201ENST00000323853 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
SNRNP200-201ENST00000323853 USH2AO75445 5202 aa2.49□□□□□ -2.01
SNRNP200-201ENST00000323853 KMT2DO14686 5537 aa2.45□□□□□ -2.02
SNRNP200-201ENST00000323853 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
SNRNP200-201ENST00000323853 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
SNRNP200-201ENST00000323853 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
SNRNP200-201ENST00000323853 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
SNRNP200-201ENST00000323853 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SNRNP200-201ENST00000323853 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
SNRNP200-201ENST00000323853 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
SNRNP200-201ENST00000323853 NEBP20929 6669 aa2.32□□□□□ -2.04
SNRNP200-201ENST00000323853 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
SNRNP200-201ENST00000323853 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
SNRNP200-201ENST00000323853 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
SNRNP200-201ENST00000323853 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
SNRNP200-201ENST00000323853 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SNRNP200-201ENST00000323853 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
SNRNP200-201ENST00000323853 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
SNRNP200-201ENST00000323853 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
SNRNP200-201ENST00000323853 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
SNRNP200-201ENST00000323853 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
SNRNP200-201ENST00000323853 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
SNRNP200-201ENST00000323853 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
SNRNP200-201ENST00000323853 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
SNRNP200-201ENST00000323853 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
SNRNP200-201ENST00000323853 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
SNRNP200-201ENST00000323853 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
SNRNP200-201ENST00000323853 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SNRNP200-201ENST00000323853 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
SNRNP200-201ENST00000323853 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
SNRNP200-201ENST00000323853 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
SNRNP200-201ENST00000323853 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
SNRNP200-201ENST00000323853 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
SNRNP200-201ENST00000323853 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
SNRNP200-201ENST00000323853 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SNRNP200-201ENST00000323853 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SNRNP200-201ENST00000323853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
SNRNP200-201ENST00000323853 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
SNRNP200-201ENST00000323853 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
SNRNP200-201ENST00000323853 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 446 ms