RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
NCL-201ENST00000322723 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
NCL-201ENST00000322723 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
NCL-201ENST00000322723 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
NCL-201ENST00000322723 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
NCL-201ENST00000322723 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
NCL-201ENST00000322723 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
NCL-201ENST00000322723 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
NCL-201ENST00000322723 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
NCL-201ENST00000322723 MT1MQ8N339 61 aa3.98□□□□□ -1.77
NCL-201ENST00000322723 MT1GP13640 62 aa3.97□□□□□ -1.77
NCL-201ENST00000322723 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
NCL-201ENST00000322723 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
NCL-201ENST00000322723 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
NCL-201ENST00000322723 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
NCL-201ENST00000322723 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
NCL-201ENST00000322723 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
NCL-201ENST00000322723 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
NCL-201ENST00000322723 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
NCL-201ENST00000322723 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
NCL-201ENST00000322723 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
NCL-201ENST00000322723 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
NCL-201ENST00000322723 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
NCL-201ENST00000322723 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
NCL-201ENST00000322723 MT1AP04731 61 aa3.59□□□□□ -1.84
NCL-201ENST00000322723 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
NCL-201ENST00000322723 PRM1P04553 51 aa3.55□□□□□ -1.84
NCL-201ENST00000322723 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
NCL-201ENST00000322723 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
NCL-201ENST00000322723 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
NCL-201ENST00000322723 SPRR2EP22531 72 aa3.5□□□□□ -1.85
NCL-201ENST00000322723 SPRR2BP35325 72 aa3.5□□□□□ -1.85
NCL-201ENST00000322723 SPRR2AP35326 72 aa3.5□□□□□ -1.85
NCL-201ENST00000322723 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
NCL-201ENST00000322723 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
NCL-201ENST00000322723 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
NCL-201ENST00000322723 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
NCL-201ENST00000322723 SPRR2DP22532 72 aa3.36□□□□□ -1.87
NCL-201ENST00000322723 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
NCL-201ENST00000322723 NEBP20929 6669 aa3.23□□□□□ -1.89
NCL-201ENST00000322723 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
NCL-201ENST00000322723 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
NCL-201ENST00000322723 MT3P25713 68 aa3.16□□□□□ -1.9
NCL-201ENST00000322723 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
NCL-201ENST00000322723 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
NCL-201ENST00000322723 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
NCL-201ENST00000322723 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
NCL-201ENST00000322723 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
NCL-201ENST00000322723 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
NCL-201ENST00000322723 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
NCL-201ENST00000322723 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
NCL-201ENST00000322723 MT4P47944 62 aa2.93□□□□□ -1.94
NCL-201ENST00000322723 LCE1DQ5T752 114 aa2.86□□□□□ -1.95
NCL-201ENST00000322723 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
NCL-201ENST00000322723 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
NCL-201ENST00000322723 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
NCL-201ENST00000322723 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
NCL-201ENST00000322723 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
NCL-201ENST00000322723 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
NCL-201ENST00000322723 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
NCL-201ENST00000322723 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
NCL-201ENST00000322723 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
NCL-201ENST00000322723 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
NCL-201ENST00000322723 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
NCL-201ENST00000322723 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
NCL-201ENST00000322723 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
NCL-201ENST00000322723 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
NCL-201ENST00000322723 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
NCL-201ENST00000322723 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
NCL-201ENST00000322723 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
NCL-201ENST00000322723 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
NCL-201ENST00000322723 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
NCL-201ENST00000322723 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
NCL-201ENST00000322723 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
NCL-201ENST00000322723 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
NCL-201ENST00000322723 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
NCL-201ENST00000322723 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 84.4 ms