RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KRTAP2-1Q9BYU5 128 aa7.54□□□□□ -1.2
PNKP-201ENST00000322344 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
PNKP-201ENST00000322344 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
PNKP-201ENST00000322344 MT1GP13640 62 aa7.38□□□□□ -1.23
PNKP-201ENST00000322344 MT1MQ8N339 61 aa7.34□□□□□ -1.23
PNKP-201ENST00000322344 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
PNKP-201ENST00000322344 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
PNKP-201ENST00000322344 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
PNKP-201ENST00000322344 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
PNKP-201ENST00000322344 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.26
PNKP-201ENST00000322344 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
PNKP-201ENST00000322344 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
PNKP-201ENST00000322344 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
PNKP-201ENST00000322344 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
PNKP-201ENST00000322344 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
PNKP-201ENST00000322344 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
PNKP-201ENST00000322344 LCE1AQ5T7P2 110 aa6.72□□□□□ -1.33
PNKP-201ENST00000322344 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
PNKP-201ENST00000322344 MT1AP04731 61 aa6.62□□□□□ -1.35
PNKP-201ENST00000322344 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
PNKP-201ENST00000322344 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
PNKP-201ENST00000322344 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
PNKP-201ENST00000322344 SPRR2EP22531 72 aa6.57□□□□□ -1.36
PNKP-201ENST00000322344 SPRR2BP35325 72 aa6.57□□□□□ -1.36
PNKP-201ENST00000322344 SPRR2AP35326 72 aa6.57□□□□□ -1.36
PNKP-201ENST00000322344 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
PNKP-201ENST00000322344 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
PNKP-201ENST00000322344 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
PNKP-201ENST00000322344 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
PNKP-201ENST00000322344 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
PNKP-201ENST00000322344 SPRR2DP22532 72 aa6.31□□□□□ -1.4
PNKP-201ENST00000322344 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
PNKP-201ENST00000322344 LCE3DQ9BYE3 92 aa6.27□□□□□ -1.41
PNKP-201ENST00000322344 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
PNKP-201ENST00000322344 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
PNKP-201ENST00000322344 LCE3EQ5T5B0 92 aa6.19□□□□□ -1.42
PNKP-201ENST00000322344 NEBP20929 6669 aa6.09□□□□□ -1.43
PNKP-201ENST00000322344 MT3P25713 68 aa5.96□□□□□ -1.45
PNKP-201ENST00000322344 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
PNKP-201ENST00000322344 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
PNKP-201ENST00000322344 PRM1P04553 51 aa5.77□□□□□ -1.49
PNKP-201ENST00000322344 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
PNKP-201ENST00000322344 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
PNKP-201ENST00000322344 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
PNKP-201ENST00000322344 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
PNKP-201ENST00000322344 MT4P47944 62 aa5.47□□□□□ -1.53
PNKP-201ENST00000322344 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
PNKP-201ENST00000322344 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
PNKP-201ENST00000322344 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
PNKP-201ENST00000322344 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
PNKP-201ENST00000322344 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.57
PNKP-201ENST00000322344 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
PNKP-201ENST00000322344 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
PNKP-201ENST00000322344 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
PNKP-201ENST00000322344 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
PNKP-201ENST00000322344 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
PNKP-201ENST00000322344 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
PNKP-201ENST00000322344 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
PNKP-201ENST00000322344 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
PNKP-201ENST00000322344 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
PNKP-201ENST00000322344 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
PNKP-201ENST00000322344 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
PNKP-201ENST00000322344 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
PNKP-201ENST00000322344 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
PNKP-201ENST00000322344 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
PNKP-201ENST00000322344 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
PNKP-201ENST00000322344 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
PNKP-201ENST00000322344 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
PNKP-201ENST00000322344 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
PNKP-201ENST00000322344 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
PNKP-201ENST00000322344 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
PNKP-201ENST00000322344 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
PNKP-201ENST00000322344 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
PNKP-201ENST00000322344 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
PNKP-201ENST00000322344 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
PNKP-201ENST00000322344 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
PNKP-201ENST00000322344 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms