RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
CRTAP-201ENST00000320954 MT1LQ93083 61 aa3.69□□□□□ -1.82
CRTAP-201ENST00000320954 MT1EP04732 61 aa3.68□□□□□ -1.82
CRTAP-201ENST00000320954 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
CRTAP-201ENST00000320954 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
CRTAP-201ENST00000320954 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
CRTAP-201ENST00000320954 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
CRTAP-201ENST00000320954 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CRTAP-201ENST00000320954 PRM1P04553 51 aa3.61□□□□□ -1.83
CRTAP-201ENST00000320954 MT1MQ8N339 61 aa3.61□□□□□ -1.83
CRTAP-201ENST00000320954 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
CRTAP-201ENST00000320954 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.84
CRTAP-201ENST00000320954 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
CRTAP-201ENST00000320954 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
CRTAP-201ENST00000320954 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
CRTAP-201ENST00000320954 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
CRTAP-201ENST00000320954 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
CRTAP-201ENST00000320954 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
CRTAP-201ENST00000320954 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
CRTAP-201ENST00000320954 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
CRTAP-201ENST00000320954 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
CRTAP-201ENST00000320954 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
CRTAP-201ENST00000320954 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
CRTAP-201ENST00000320954 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
CRTAP-201ENST00000320954 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
CRTAP-201ENST00000320954 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
CRTAP-201ENST00000320954 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CRTAP-201ENST00000320954 MUC2Q02817 5179 aa3.28□□□□□ -1.88
CRTAP-201ENST00000320954 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
CRTAP-201ENST00000320954 MT1AP04731 61 aa3.26□□□□□ -1.89
CRTAP-201ENST00000320954 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
CRTAP-201ENST00000320954 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
CRTAP-201ENST00000320954 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
CRTAP-201ENST00000320954 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
CRTAP-201ENST00000320954 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
CRTAP-201ENST00000320954 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
CRTAP-201ENST00000320954 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.92
CRTAP-201ENST00000320954 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
CRTAP-201ENST00000320954 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
CRTAP-201ENST00000320954 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CRTAP-201ENST00000320954 KMT2DO14686 5537 aa2.88□□□□□ -1.95
CRTAP-201ENST00000320954 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
CRTAP-201ENST00000320954 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CRTAP-201ENST00000320954 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
CRTAP-201ENST00000320954 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
CRTAP-201ENST00000320954 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
CRTAP-201ENST00000320954 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
CRTAP-201ENST00000320954 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
CRTAP-201ENST00000320954 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
CRTAP-201ENST00000320954 NEBP20929 6669 aa2.76□□□□□ -1.97
CRTAP-201ENST00000320954 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CRTAP-201ENST00000320954 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
CRTAP-201ENST00000320954 USH2AO75445 5202 aa2.72□□□□□ -1.97
CRTAP-201ENST00000320954 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
CRTAP-201ENST00000320954 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CRTAP-201ENST00000320954 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
CRTAP-201ENST00000320954 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
CRTAP-201ENST00000320954 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
CRTAP-201ENST00000320954 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
CRTAP-201ENST00000320954 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
CRTAP-201ENST00000320954 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CRTAP-201ENST00000320954 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
CRTAP-201ENST00000320954 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
CRTAP-201ENST00000320954 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
CRTAP-201ENST00000320954 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
CRTAP-201ENST00000320954 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
CRTAP-201ENST00000320954 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CRTAP-201ENST00000320954 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
CRTAP-201ENST00000320954 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
CRTAP-201ENST00000320954 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
CRTAP-201ENST00000320954 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
CRTAP-201ENST00000320954 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CRTAP-201ENST00000320954 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CRTAP-201ENST00000320954 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
CRTAP-201ENST00000320954 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CRTAP-201ENST00000320954 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
CRTAP-201ENST00000320954 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms