RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
PACS1-201ENST00000320580 KMT2DO14686 5537 aa5.36□□□□□ -1.55
PACS1-201ENST00000320580 MT1LQ93083 61 aa5.36□□□□□ -1.55
PACS1-201ENST00000320580 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
PACS1-201ENST00000320580 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
PACS1-201ENST00000320580 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
PACS1-201ENST00000320580 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
PACS1-201ENST00000320580 MT1EP04732 61 aa5.24□□□□□ -1.57
PACS1-201ENST00000320580 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
PACS1-201ENST00000320580 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
PACS1-201ENST00000320580 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
PACS1-201ENST00000320580 PRM1P04553 51 aa5.18□□□□□ -1.58
PACS1-201ENST00000320580 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
PACS1-201ENST00000320580 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
PACS1-201ENST00000320580 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
PACS1-201ENST00000320580 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
PACS1-201ENST00000320580 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
PACS1-201ENST00000320580 SPRR2EP22531 72 aa5.05□□□□□ -1.6
PACS1-201ENST00000320580 SPRR2BP35325 72 aa5.05□□□□□ -1.6
PACS1-201ENST00000320580 SPRR2AP35326 72 aa5.05□□□□□ -1.6
PACS1-201ENST00000320580 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
PACS1-201ENST00000320580 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
PACS1-201ENST00000320580 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
PACS1-201ENST00000320580 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
PACS1-201ENST00000320580 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
PACS1-201ENST00000320580 MT1MQ8N339 61 aa4.96□□□□□ -1.62
PACS1-201ENST00000320580 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
PACS1-201ENST00000320580 SPRR2DP22532 72 aa4.84□□□□□ -1.63
PACS1-201ENST00000320580 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
PACS1-201ENST00000320580 MT1AP04731 61 aa4.65□□□□□ -1.66
PACS1-201ENST00000320580 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PACS1-201ENST00000320580 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
PACS1-201ENST00000320580 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
PACS1-201ENST00000320580 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
PACS1-201ENST00000320580 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.68
PACS1-201ENST00000320580 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PACS1-201ENST00000320580 MT3P25713 68 aa4.44□□□□□ -1.7
PACS1-201ENST00000320580 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
PACS1-201ENST00000320580 MT4P47944 62 aa4.39□□□□□ -1.71
PACS1-201ENST00000320580 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
PACS1-201ENST00000320580 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
PACS1-201ENST00000320580 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
PACS1-201ENST00000320580 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
PACS1-201ENST00000320580 NEBP20929 6669 aa4.19□□□□□ -1.74
PACS1-201ENST00000320580 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
PACS1-201ENST00000320580 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
PACS1-201ENST00000320580 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
PACS1-201ENST00000320580 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
PACS1-201ENST00000320580 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
PACS1-201ENST00000320580 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
PACS1-201ENST00000320580 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
PACS1-201ENST00000320580 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
PACS1-201ENST00000320580 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
PACS1-201ENST00000320580 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
PACS1-201ENST00000320580 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
PACS1-201ENST00000320580 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
PACS1-201ENST00000320580 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
PACS1-201ENST00000320580 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
PACS1-201ENST00000320580 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
PACS1-201ENST00000320580 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
PACS1-201ENST00000320580 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
PACS1-201ENST00000320580 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
PACS1-201ENST00000320580 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
PACS1-201ENST00000320580 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
PACS1-201ENST00000320580 KRTAP5-8O75690 187 aa3□□□□□ -1.93
PACS1-201ENST00000320580 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
PACS1-201ENST00000320580 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
PACS1-201ENST00000320580 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
PACS1-201ENST00000320580 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
PACS1-201ENST00000320580 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PACS1-201ENST00000320580 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
PACS1-201ENST00000320580 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PACS1-201ENST00000320580 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PACS1-201ENST00000320580 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
PACS1-201ENST00000320580 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
PACS1-201ENST00000320580 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PACS1-201ENST00000320580 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms