RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 KRTAP2-3P0C7H8 128 aa7.13□□□□□ -1.27
CPNE7-202ENST00000319518 KRTAP2-4Q9BYR9 128 aa7.13□□□□□ -1.27
CPNE7-202ENST00000319518 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
CPNE7-202ENST00000319518 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
CPNE7-202ENST00000319518 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.28
CPNE7-202ENST00000319518 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
CPNE7-202ENST00000319518 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.31
CPNE7-202ENST00000319518 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
CPNE7-202ENST00000319518 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
CPNE7-202ENST00000319518 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
CPNE7-202ENST00000319518 SPRR2FQ96RM1 72 aa6.76□□□□□ -1.33
CPNE7-202ENST00000319518 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
CPNE7-202ENST00000319518 MT1MQ8N339 61 aa6.73□□□□□ -1.33
CPNE7-202ENST00000319518 MT1GP13640 62 aa6.69□□□□□ -1.34
CPNE7-202ENST00000319518 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
CPNE7-202ENST00000319518 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
CPNE7-202ENST00000319518 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
CPNE7-202ENST00000319518 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
CPNE7-202ENST00000319518 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
CPNE7-202ENST00000319518 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
CPNE7-202ENST00000319518 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
CPNE7-202ENST00000319518 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
CPNE7-202ENST00000319518 SPRR2EP22531 72 aa6.26□□□□□ -1.41
CPNE7-202ENST00000319518 SPRR2BP35325 72 aa6.26□□□□□ -1.41
CPNE7-202ENST00000319518 SPRR2AP35326 72 aa6.26□□□□□ -1.41
CPNE7-202ENST00000319518 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
CPNE7-202ENST00000319518 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
CPNE7-202ENST00000319518 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
CPNE7-202ENST00000319518 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
CPNE7-202ENST00000319518 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
CPNE7-202ENST00000319518 MT1AP04731 61 aa6□□□□□ -1.45
CPNE7-202ENST00000319518 SPRR2DP22532 72 aa5.99□□□□□ -1.45
CPNE7-202ENST00000319518 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
CPNE7-202ENST00000319518 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
CPNE7-202ENST00000319518 NEBP20929 6669 aa5.84□□□□□ -1.47
CPNE7-202ENST00000319518 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
CPNE7-202ENST00000319518 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
CPNE7-202ENST00000319518 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
CPNE7-202ENST00000319518 PRM1P04553 51 aa5.6□□□□□ -1.51
CPNE7-202ENST00000319518 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CPNE7-202ENST00000319518 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
CPNE7-202ENST00000319518 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
CPNE7-202ENST00000319518 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
CPNE7-202ENST00000319518 MT3P25713 68 aa5.36□□□□□ -1.55
CPNE7-202ENST00000319518 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.56
CPNE7-202ENST00000319518 MT4P47944 62 aa5.33□□□□□ -1.56
CPNE7-202ENST00000319518 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
CPNE7-202ENST00000319518 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
CPNE7-202ENST00000319518 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
CPNE7-202ENST00000319518 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
CPNE7-202ENST00000319518 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
CPNE7-202ENST00000319518 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.62
CPNE7-202ENST00000319518 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
CPNE7-202ENST00000319518 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
CPNE7-202ENST00000319518 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
CPNE7-202ENST00000319518 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CPNE7-202ENST00000319518 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
CPNE7-202ENST00000319518 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
CPNE7-202ENST00000319518 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CPNE7-202ENST00000319518 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
CPNE7-202ENST00000319518 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
CPNE7-202ENST00000319518 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
CPNE7-202ENST00000319518 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
CPNE7-202ENST00000319518 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
CPNE7-202ENST00000319518 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
CPNE7-202ENST00000319518 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CPNE7-202ENST00000319518 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CPNE7-202ENST00000319518 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
CPNE7-202ENST00000319518 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
CPNE7-202ENST00000319518 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
CPNE7-202ENST00000319518 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
CPNE7-202ENST00000319518 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
CPNE7-202ENST00000319518 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
CPNE7-202ENST00000319518 KRTAP21-1Q3LI58 79 aa3.54□□□□□ -1.84
CPNE7-202ENST00000319518 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
CPNE7-202ENST00000319518 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
CPNE7-202ENST00000319518 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 82.8 ms