RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
RPGR-201ENST00000318842 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
RPGR-201ENST00000318842 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
RPGR-201ENST00000318842 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
RPGR-201ENST00000318842 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
RPGR-201ENST00000318842 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
RPGR-201ENST00000318842 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
RPGR-201ENST00000318842 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.89
RPGR-201ENST00000318842 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
RPGR-201ENST00000318842 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
RPGR-201ENST00000318842 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
RPGR-201ENST00000318842 MT1GP13640 62 aa3.24□□□□□ -1.89
RPGR-201ENST00000318842 MT1LQ93083 61 aa3.24□□□□□ -1.89
RPGR-201ENST00000318842 MT1EP04732 61 aa3.2□□□□□ -1.9
RPGR-201ENST00000318842 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
RPGR-201ENST00000318842 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
RPGR-201ENST00000318842 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
RPGR-201ENST00000318842 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
RPGR-201ENST00000318842 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
RPGR-201ENST00000318842 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
RPGR-201ENST00000318842 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
RPGR-201ENST00000318842 NEBP20929 6669 aa3.02□□□□□ -1.93
RPGR-201ENST00000318842 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
RPGR-201ENST00000318842 MT1MQ8N339 61 aa2.99□□□□□ -1.93
RPGR-201ENST00000318842 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
RPGR-201ENST00000318842 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
RPGR-201ENST00000318842 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
RPGR-201ENST00000318842 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
RPGR-201ENST00000318842 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
RPGR-201ENST00000318842 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
RPGR-201ENST00000318842 PRM1P04553 51 aa2.8□□□□□ -1.96
RPGR-201ENST00000318842 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
RPGR-201ENST00000318842 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
RPGR-201ENST00000318842 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
RPGR-201ENST00000318842 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
RPGR-201ENST00000318842 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
RPGR-201ENST00000318842 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
RPGR-201ENST00000318842 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
RPGR-201ENST00000318842 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
RPGR-201ENST00000318842 MT1AP04731 61 aa2.6□□□□□ -1.99
RPGR-201ENST00000318842 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
RPGR-201ENST00000318842 LCE1EQ5T753 118 aa2.59□□□□□ -2
RPGR-201ENST00000318842 SPRR2EP22531 72 aa2.55□□□□□ -2
RPGR-201ENST00000318842 SPRR2BP35325 72 aa2.55□□□□□ -2
RPGR-201ENST00000318842 SPRR2AP35326 72 aa2.55□□□□□ -2
RPGR-201ENST00000318842 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
RPGR-201ENST00000318842 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
RPGR-201ENST00000318842 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
RPGR-201ENST00000318842 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
RPGR-201ENST00000318842 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
RPGR-201ENST00000318842 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
RPGR-201ENST00000318842 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
RPGR-201ENST00000318842 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
RPGR-201ENST00000318842 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
RPGR-201ENST00000318842 SPRR2DP22532 72 aa2.4□□□□□ -2.02
RPGR-201ENST00000318842 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
RPGR-201ENST00000318842 MT4P47944 62 aa2.35□□□□□ -2.03
RPGR-201ENST00000318842 MT3P25713 68 aa2.33□□□□□ -2.04
RPGR-201ENST00000318842 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
RPGR-201ENST00000318842 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
RPGR-201ENST00000318842 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
RPGR-201ENST00000318842 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
RPGR-201ENST00000318842 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
RPGR-201ENST00000318842 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
RPGR-201ENST00000318842 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
RPGR-201ENST00000318842 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
RPGR-201ENST00000318842 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
RPGR-201ENST00000318842 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
RPGR-201ENST00000318842 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
RPGR-201ENST00000318842 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
RPGR-201ENST00000318842 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
RPGR-201ENST00000318842 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
RPGR-201ENST00000318842 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
RPGR-201ENST00000318842 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
RPGR-201ENST00000318842 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
RPGR-201ENST00000318842 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
RPGR-201ENST00000318842 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 335 ms