RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.21
GRAMD1A-201ENST00000317991 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
GRAMD1A-201ENST00000317991 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
GRAMD1A-201ENST00000317991 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
GRAMD1A-201ENST00000317991 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
GRAMD1A-201ENST00000317991 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
GRAMD1A-201ENST00000317991 MT1GP13640 62 aa7.2□□□□□ -1.26
GRAMD1A-201ENST00000317991 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
GRAMD1A-201ENST00000317991 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
GRAMD1A-201ENST00000317991 KRTAP12-4P60329 112 aa7.07□□□□□ -1.28
GRAMD1A-201ENST00000317991 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
GRAMD1A-201ENST00000317991 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
GRAMD1A-201ENST00000317991 MT1MQ8N339 61 aa6.98□□□□□ -1.29
GRAMD1A-201ENST00000317991 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.3
GRAMD1A-201ENST00000317991 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
GRAMD1A-201ENST00000317991 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
GRAMD1A-201ENST00000317991 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
GRAMD1A-201ENST00000317991 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
GRAMD1A-201ENST00000317991 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
GRAMD1A-201ENST00000317991 SYNE1Q8NF91 8797 aaKnown RBP6.7□□□□□ -1.34
GRAMD1A-201ENST00000317991 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
GRAMD1A-201ENST00000317991 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
GRAMD1A-201ENST00000317991 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
GRAMD1A-201ENST00000317991 KRTAP6-1Q3LI64 71 aa6.49□□□□□ -1.37
GRAMD1A-201ENST00000317991 MT1AP04731 61 aa6.44□□□□□ -1.38
GRAMD1A-201ENST00000317991 LCE1AQ5T7P2 110 aa6.43□□□□□ -1.38
GRAMD1A-201ENST00000317991 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
GRAMD1A-201ENST00000317991 LCE3DQ9BYE3 92 aa6.4□□□□□ -1.38
GRAMD1A-201ENST00000317991 SPRR2EP22531 72 aa6.4□□□□□ -1.39
GRAMD1A-201ENST00000317991 SPRR2BP35325 72 aa6.4□□□□□ -1.39
GRAMD1A-201ENST00000317991 SPRR2AP35326 72 aa6.4□□□□□ -1.39
GRAMD1A-201ENST00000317991 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
GRAMD1A-201ENST00000317991 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
GRAMD1A-201ENST00000317991 LCE3EQ5T5B0 92 aa6.33□□□□□ -1.4
GRAMD1A-201ENST00000317991 PRM1P04553 51 aa6.31□□□□□ -1.4
GRAMD1A-201ENST00000317991 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
GRAMD1A-201ENST00000317991 SPRR2DP22532 72 aa6.14□□□□□ -1.43
GRAMD1A-201ENST00000317991 NEBP20929 6669 aa6.1□□□□□ -1.43
GRAMD1A-201ENST00000317991 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
GRAMD1A-201ENST00000317991 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.47
GRAMD1A-201ENST00000317991 MT3P25713 68 aa5.61□□□□□ -1.51
GRAMD1A-201ENST00000317991 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
GRAMD1A-201ENST00000317991 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
GRAMD1A-201ENST00000317991 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
GRAMD1A-201ENST00000317991 MT4P47944 62 aa5.46□□□□□ -1.54
GRAMD1A-201ENST00000317991 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
GRAMD1A-201ENST00000317991 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
GRAMD1A-201ENST00000317991 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
GRAMD1A-201ENST00000317991 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
GRAMD1A-201ENST00000317991 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
GRAMD1A-201ENST00000317991 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
GRAMD1A-201ENST00000317991 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
GRAMD1A-201ENST00000317991 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
GRAMD1A-201ENST00000317991 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
GRAMD1A-201ENST00000317991 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
GRAMD1A-201ENST00000317991 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
GRAMD1A-201ENST00000317991 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
GRAMD1A-201ENST00000317991 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
GRAMD1A-201ENST00000317991 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
GRAMD1A-201ENST00000317991 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
GRAMD1A-201ENST00000317991 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
GRAMD1A-201ENST00000317991 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
GRAMD1A-201ENST00000317991 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
GRAMD1A-201ENST00000317991 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
GRAMD1A-201ENST00000317991 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
GRAMD1A-201ENST00000317991 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
GRAMD1A-201ENST00000317991 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
GRAMD1A-201ENST00000317991 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
GRAMD1A-201ENST00000317991 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
GRAMD1A-201ENST00000317991 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
GRAMD1A-201ENST00000317991 KRTAP21-1Q3LI58 79 aa3.94□□□□□ -1.78
GRAMD1A-201ENST00000317991 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
GRAMD1A-201ENST00000317991 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
GRAMD1A-201ENST00000317991 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
GRAMD1A-201ENST00000317991 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
GRAMD1A-201ENST00000317991 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
GRAMD1A-201ENST00000317991 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 57.8 ms