RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 SPRR2BP35325 72 aa5.81□□□□□ -1.48
HNF4A-202ENST00000316673 SPRR2AP35326 72 aa5.81□□□□□ -1.48
HNF4A-202ENST00000316673 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
HNF4A-202ENST00000316673 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
HNF4A-202ENST00000316673 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
HNF4A-202ENST00000316673 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.49
HNF4A-202ENST00000316673 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
HNF4A-202ENST00000316673 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
HNF4A-202ENST00000316673 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
HNF4A-202ENST00000316673 MT1EP04732 61 aa5.65□□□□□ -1.5
HNF4A-202ENST00000316673 SPRR2DP22532 72 aa5.63□□□□□ -1.51
HNF4A-202ENST00000316673 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
HNF4A-202ENST00000316673 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
HNF4A-202ENST00000316673 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
HNF4A-202ENST00000316673 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
HNF4A-202ENST00000316673 MT1GP13640 62 aa5.49□□□□□ -1.53
HNF4A-202ENST00000316673 MT1LQ93083 61 aa5.47□□□□□ -1.53
HNF4A-202ENST00000316673 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
HNF4A-202ENST00000316673 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
HNF4A-202ENST00000316673 MT1MQ8N339 61 aa5.35□□□□□ -1.55
HNF4A-202ENST00000316673 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
HNF4A-202ENST00000316673 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
HNF4A-202ENST00000316673 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
HNF4A-202ENST00000316673 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
HNF4A-202ENST00000316673 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
HNF4A-202ENST00000316673 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.58
HNF4A-202ENST00000316673 H3BS24 57 aa5.05□□□□□ -1.6
HNF4A-202ENST00000316673 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
HNF4A-202ENST00000316673 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
HNF4A-202ENST00000316673 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
HNF4A-202ENST00000316673 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
HNF4A-202ENST00000316673 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
HNF4A-202ENST00000316673 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
HNF4A-202ENST00000316673 MT4P47944 62 aa4.94□□□□□ -1.62
HNF4A-202ENST00000316673 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
HNF4A-202ENST00000316673 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
HNF4A-202ENST00000316673 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
HNF4A-202ENST00000316673 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
HNF4A-202ENST00000316673 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
HNF4A-202ENST00000316673 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
HNF4A-202ENST00000316673 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
HNF4A-202ENST00000316673 MT1AP04731 61 aa4.69□□□□□ -1.66
HNF4A-202ENST00000316673 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
HNF4A-202ENST00000316673 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
HNF4A-202ENST00000316673 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
HNF4A-202ENST00000316673 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
HNF4A-202ENST00000316673 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
HNF4A-202ENST00000316673 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
HNF4A-202ENST00000316673 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
HNF4A-202ENST00000316673 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
HNF4A-202ENST00000316673 MT3P25713 68 aa4.3□□□□□ -1.72
HNF4A-202ENST00000316673 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
HNF4A-202ENST00000316673 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
HNF4A-202ENST00000316673 INE1O15225 51 aa4.21□□□□□ -1.74
HNF4A-202ENST00000316673 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
HNF4A-202ENST00000316673 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
HNF4A-202ENST00000316673 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
HNF4A-202ENST00000316673 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
HNF4A-202ENST00000316673 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
HNF4A-202ENST00000316673 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
HNF4A-202ENST00000316673 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HNF4A-202ENST00000316673 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HNF4A-202ENST00000316673 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
HNF4A-202ENST00000316673 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
HNF4A-202ENST00000316673 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
HNF4A-202ENST00000316673 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
HNF4A-202ENST00000316673 PRM1P04553 51 aa3.36□□□□□ -1.87
HNF4A-202ENST00000316673 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
HNF4A-202ENST00000316673 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
HNF4A-202ENST00000316673 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
HNF4A-202ENST00000316673 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
HNF4A-202ENST00000316673 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.93
HNF4A-202ENST00000316673 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
HNF4A-202ENST00000316673 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HNF4A-202ENST00000316673 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
HNF4A-202ENST00000316673 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
HNF4A-202ENST00000316673 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 93.6 ms