RNA–Protein interactions for RNA: ENST00000316068.7

MCM9-201, Transcript of minichromosome maintenance 9 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM9, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM9-201ENST00000316068 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
MCM9-201ENST00000316068 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
MCM9-201ENST00000316068 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.45
MCM9-201ENST00000316068 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
MCM9-201ENST00000316068 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
MCM9-201ENST00000316068 MT1GP13640 62 aa5.83□□□□□ -1.48
MCM9-201ENST00000316068 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
MCM9-201ENST00000316068 MT1MQ8N339 61 aa5.76□□□□□ -1.49
MCM9-201ENST00000316068 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
MCM9-201ENST00000316068 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
MCM9-201ENST00000316068 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
MCM9-201ENST00000316068 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
MCM9-201ENST00000316068 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
MCM9-201ENST00000316068 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
MCM9-201ENST00000316068 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
MCM9-201ENST00000316068 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
MCM9-201ENST00000316068 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
MCM9-201ENST00000316068 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
MCM9-201ENST00000316068 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
MCM9-201ENST00000316068 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
MCM9-201ENST00000316068 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
MCM9-201ENST00000316068 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
MCM9-201ENST00000316068 MT1AP04731 61 aa5.11□□□□□ -1.59
MCM9-201ENST00000316068 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
MCM9-201ENST00000316068 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
MCM9-201ENST00000316068 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
MCM9-201ENST00000316068 SPRR2EP22531 72 aa5.01□□□□□ -1.61
MCM9-201ENST00000316068 SPRR2BP35325 72 aa5.01□□□□□ -1.61
MCM9-201ENST00000316068 SPRR2AP35326 72 aa5.01□□□□□ -1.61
MCM9-201ENST00000316068 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
MCM9-201ENST00000316068 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
MCM9-201ENST00000316068 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
MCM9-201ENST00000316068 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
MCM9-201ENST00000316068 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
MCM9-201ENST00000316068 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
MCM9-201ENST00000316068 PRM1P04553 51 aa4.77□□□□□ -1.65
MCM9-201ENST00000316068 SPRR2DP22532 72 aa4.77□□□□□ -1.65
MCM9-201ENST00000316068 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
MCM9-201ENST00000316068 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
MCM9-201ENST00000316068 MT3P25713 68 aa4.55□□□□□ -1.68
MCM9-201ENST00000316068 NEBP20929 6669 aa4.51□□□□□ -1.69
MCM9-201ENST00000316068 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
MCM9-201ENST00000316068 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
MCM9-201ENST00000316068 MT4P47944 62 aa4.31□□□□□ -1.72
MCM9-201ENST00000316068 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
MCM9-201ENST00000316068 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
MCM9-201ENST00000316068 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
MCM9-201ENST00000316068 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
MCM9-201ENST00000316068 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
MCM9-201ENST00000316068 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
MCM9-201ENST00000316068 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
MCM9-201ENST00000316068 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
MCM9-201ENST00000316068 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
MCM9-201ENST00000316068 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
MCM9-201ENST00000316068 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
MCM9-201ENST00000316068 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
MCM9-201ENST00000316068 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
MCM9-201ENST00000316068 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
MCM9-201ENST00000316068 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
MCM9-201ENST00000316068 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
MCM9-201ENST00000316068 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
MCM9-201ENST00000316068 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
MCM9-201ENST00000316068 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
MCM9-201ENST00000316068 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
MCM9-201ENST00000316068 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
MCM9-201ENST00000316068 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
MCM9-201ENST00000316068 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
MCM9-201ENST00000316068 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
MCM9-201ENST00000316068 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
MCM9-201ENST00000316068 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
MCM9-201ENST00000316068 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
MCM9-201ENST00000316068 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
MCM9-201ENST00000316068 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
MCM9-201ENST00000316068 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
MCM9-201ENST00000316068 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
MCM9-201ENST00000316068 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
MCM9-201ENST00000316068 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms