RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
SH3PXD2A-201ENST00000315994 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SH3PXD2A-201ENST00000315994 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
SH3PXD2A-201ENST00000315994 MT1MQ8N339 61 aa4.13□□□□□ -1.75
SH3PXD2A-201ENST00000315994 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SH3PXD2A-201ENST00000315994 MT4P47944 62 aa4.06□□□□□ -1.76
SH3PXD2A-201ENST00000315994 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
SH3PXD2A-201ENST00000315994 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
SH3PXD2A-201ENST00000315994 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
SH3PXD2A-201ENST00000315994 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
SH3PXD2A-201ENST00000315994 MT3P25713 68 aa3.96□□□□□ -1.77
SH3PXD2A-201ENST00000315994 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
SH3PXD2A-201ENST00000315994 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
SH3PXD2A-201ENST00000315994 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
SH3PXD2A-201ENST00000315994 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
SH3PXD2A-201ENST00000315994 MUC2Q02817 5179 aa3.83□□□□□ -1.8
SH3PXD2A-201ENST00000315994 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
SH3PXD2A-201ENST00000315994 MT1AP04731 61 aa3.82□□□□□ -1.8
SH3PXD2A-201ENST00000315994 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
SH3PXD2A-201ENST00000315994 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
SH3PXD2A-201ENST00000315994 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
SH3PXD2A-201ENST00000315994 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
SH3PXD2A-201ENST00000315994 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SH3PXD2A-201ENST00000315994 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
SH3PXD2A-201ENST00000315994 PRM1P04553 51 aa3.73□□□□□ -1.81
SH3PXD2A-201ENST00000315994 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
SH3PXD2A-201ENST00000315994 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
SH3PXD2A-201ENST00000315994 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.82
SH3PXD2A-201ENST00000315994 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
SH3PXD2A-201ENST00000315994 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
SH3PXD2A-201ENST00000315994 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
SH3PXD2A-201ENST00000315994 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
SH3PXD2A-201ENST00000315994 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
SH3PXD2A-201ENST00000315994 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
SH3PXD2A-201ENST00000315994 USH2AO75445 5202 aa3.56□□□□□ -1.84
SH3PXD2A-201ENST00000315994 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
SH3PXD2A-201ENST00000315994 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SH3PXD2A-201ENST00000315994 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SH3PXD2A-201ENST00000315994 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SH3PXD2A-201ENST00000315994 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
SH3PXD2A-201ENST00000315994 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SH3PXD2A-201ENST00000315994 KMT2DO14686 5537 aa3.29□□□□□ -1.88
SH3PXD2A-201ENST00000315994 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SH3PXD2A-201ENST00000315994 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
SH3PXD2A-201ENST00000315994 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
SH3PXD2A-201ENST00000315994 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
SH3PXD2A-201ENST00000315994 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
SH3PXD2A-201ENST00000315994 NEBP20929 6669 aa3.17□□□□□ -1.9
SH3PXD2A-201ENST00000315994 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
SH3PXD2A-201ENST00000315994 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
SH3PXD2A-201ENST00000315994 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SH3PXD2A-201ENST00000315994 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
SH3PXD2A-201ENST00000315994 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
SH3PXD2A-201ENST00000315994 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SH3PXD2A-201ENST00000315994 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
SH3PXD2A-201ENST00000315994 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
SH3PXD2A-201ENST00000315994 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
SH3PXD2A-201ENST00000315994 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
SH3PXD2A-201ENST00000315994 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
SH3PXD2A-201ENST00000315994 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SH3PXD2A-201ENST00000315994 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SH3PXD2A-201ENST00000315994 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
SH3PXD2A-201ENST00000315994 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
SH3PXD2A-201ENST00000315994 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SH3PXD2A-201ENST00000315994 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
SH3PXD2A-201ENST00000315994 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
SH3PXD2A-201ENST00000315994 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
SH3PXD2A-201ENST00000315994 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
SH3PXD2A-201ENST00000315994 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SH3PXD2A-201ENST00000315994 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
SH3PXD2A-201ENST00000315994 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
SH3PXD2A-201ENST00000315994 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
SH3PXD2A-201ENST00000315994 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SH3PXD2A-201ENST00000315994 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SH3PXD2A-201ENST00000315994 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
SH3PXD2A-201ENST00000315994 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SH3PXD2A-201ENST00000315994 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
SH3PXD2A-201ENST00000315994 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms