RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
PRKDC-201ENST00000314191 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
PRKDC-201ENST00000314191 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
PRKDC-201ENST00000314191 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
PRKDC-201ENST00000314191 USH2AO75445 5202 aa2.01□□□□□ -2.09
PRKDC-201ENST00000314191 MT1MQ8N339 61 aa2.01□□□□□ -2.09
PRKDC-201ENST00000314191 LCE2DQ5TA82 110 aaPredicted RBP2□□□□□ -2.09
PRKDC-201ENST00000314191 LOC100996750A0A140TA64 210 aa2□□□□□ -2.09
PRKDC-201ENST00000314191 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
PRKDC-201ENST00000314191 SPRR2DP22532 72 aa1.99□□□□□ -2.09
PRKDC-201ENST00000314191 KRTAP9-2Q9BYQ4 174 aa1.98□□□□□ -2.09
PRKDC-201ENST00000314191 KRTAP12-4P60329 112 aa1.96□□□□□ -2.09
PRKDC-201ENST00000314191 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
PRKDC-201ENST00000314191 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
PRKDC-201ENST00000314191 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
PRKDC-201ENST00000314191 FCGBPQ9Y6R7 5405 aaPredicted RBP1.87□□□□□ -2.11
PRKDC-201ENST00000314191 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
PRKDC-201ENST00000314191 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
PRKDC-201ENST00000314191 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
PRKDC-201ENST00000314191 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
PRKDC-201ENST00000314191 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.12
PRKDC-201ENST00000314191 KRTAP4-9Q9BYQ8 210 aa1.83□□□□□ -2.12
PRKDC-201ENST00000314191 LCE5AQ5TCM9 118 aa1.82□□□□□ -2.12
PRKDC-201ENST00000314191 MT1AP04731 61 aa1.82□□□□□ -2.12
PRKDC-201ENST00000314191 LCE1AQ5T7P2 110 aa1.82□□□□□ -2.12
PRKDC-201ENST00000314191 KRTAP9-6A0A140TA67 174 aa1.82□□□□□ -2.12
PRKDC-201ENST00000314191 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
PRKDC-201ENST00000314191 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
PRKDC-201ENST00000314191 KMT2DO14686 5537 aa1.79□□□□□ -2.12
PRKDC-201ENST00000314191 MT4P47944 62 aa1.78□□□□□ -2.12
PRKDC-201ENST00000314191 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
PRKDC-201ENST00000314191 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
PRKDC-201ENST00000314191 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.75□□□□□ -2.13
PRKDC-201ENST00000314191 KRTAP9-7A8MTY7 169 aa1.74□□□□□ -2.13
PRKDC-201ENST00000314191 PRM1P04553 51 aa1.71□□□□□ -2.13
PRKDC-201ENST00000314191 KRTAP9-4Q9BYQ2 154 aa1.69□□□□□ -2.14
PRKDC-201ENST00000314191 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
PRKDC-201ENST00000314191 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
PRKDC-201ENST00000314191 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
PRKDC-201ENST00000314191 LCE1DQ5T752 114 aa1.64□□□□□ -2.15
PRKDC-201ENST00000314191 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
PRKDC-201ENST00000314191 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
PRKDC-201ENST00000314191 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
PRKDC-201ENST00000314191 LCE4AQ5TA78 99 aa1.58□□□□□ -2.16
PRKDC-201ENST00000314191 KRTAP4-6Q9BYQ5 205 aa1.54□□□□□ -2.16
PRKDC-201ENST00000314191 NEBP20929 6669 aa1.5□□□□□ -2.17
PRKDC-201ENST00000314191 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
PRKDC-201ENST00000314191 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
PRKDC-201ENST00000314191 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
PRKDC-201ENST00000314191 MDN1Q9NU22 5596 aa1.46□□□□□ -2.18
PRKDC-201ENST00000314191 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
PRKDC-201ENST00000314191 LCE1EQ5T753 118 aa1.42□□□□□ -2.18
PRKDC-201ENST00000314191 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
PRKDC-201ENST00000314191 KRTAP5-4Q6L8H1 288 aa1.38□□□□□ -2.19
PRKDC-201ENST00000314191 KRTAP9-9Q9BYP9 154 aa1.37□□□□□ -2.19
PRKDC-201ENST00000314191 KRTAP4-11Q9BYQ6 195 aa1.32□□□□□ -2.2
PRKDC-201ENST00000314191 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
PRKDC-201ENST00000314191 KRTAP5-3Q6L8H2 238 aa1.24□□□□□ -2.21
PRKDC-201ENST00000314191 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
PRKDC-201ENST00000314191 KRTAP4-12Q9BQ66 201 aa1.24□□□□□ -2.21
PRKDC-201ENST00000314191 KRTAP4-2Q9BYR5 136 aa1.24□□□□□ -2.21
PRKDC-201ENST00000314191 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
PRKDC-201ENST00000314191 KRTAP5-2Q701N4 177 aa1.22□□□□□ -2.21
PRKDC-201ENST00000314191 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PRKDC-201ENST00000314191 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
PRKDC-201ENST00000314191 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
PRKDC-201ENST00000314191 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
PRKDC-201ENST00000314191 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
PRKDC-201ENST00000314191 KRTAP5-1Q6L8H4 278 aa1.09□□□□□ -2.23
PRKDC-201ENST00000314191 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
PRKDC-201ENST00000314191 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
PRKDC-201ENST00000314191 KRTAP5-11Q6L8G4 156 aa0.99□□□□□ -2.25
PRKDC-201ENST00000314191 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.95□□□□□ -2.26
PRKDC-201ENST00000314191 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
PRKDC-201ENST00000314191 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
PRKDC-201ENST00000314191 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
PRKDC-201ENST00000314191 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms