RNA–Protein interactions for RNA: ENST00000312352.11

PFKM-201, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-201ENST00000312352 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
PFKM-201ENST00000312352 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
PFKM-201ENST00000312352 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
PFKM-201ENST00000312352 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
PFKM-201ENST00000312352 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
PFKM-201ENST00000312352 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
PFKM-201ENST00000312352 MT2AP02795 61 aa3.84□□□□□ -1.79
PFKM-201ENST00000312352 USH2AO75445 5202 aa3.83□□□□□ -1.8
PFKM-201ENST00000312352 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
PFKM-201ENST00000312352 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
PFKM-201ENST00000312352 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
PFKM-201ENST00000312352 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
PFKM-201ENST00000312352 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
PFKM-201ENST00000312352 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
PFKM-201ENST00000312352 MT1GP13640 62 aa3.7□□□□□ -1.82
PFKM-201ENST00000312352 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
PFKM-201ENST00000312352 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
PFKM-201ENST00000312352 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
PFKM-201ENST00000312352 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
PFKM-201ENST00000312352 MT1LQ93083 61 aa3.64□□□□□ -1.83
PFKM-201ENST00000312352 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PFKM-201ENST00000312352 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
PFKM-201ENST00000312352 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
PFKM-201ENST00000312352 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
PFKM-201ENST00000312352 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
PFKM-201ENST00000312352 MT1EP04732 61 aa3.48□□□□□ -1.85
PFKM-201ENST00000312352 MT1AP04731 61 aa3.38□□□□□ -1.87
PFKM-201ENST00000312352 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
PFKM-201ENST00000312352 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
PFKM-201ENST00000312352 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
PFKM-201ENST00000312352 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
PFKM-201ENST00000312352 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
PFKM-201ENST00000312352 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
PFKM-201ENST00000312352 MT1MQ8N339 61 aa3.21□□□□□ -1.9
PFKM-201ENST00000312352 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
PFKM-201ENST00000312352 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
PFKM-201ENST00000312352 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
PFKM-201ENST00000312352 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
PFKM-201ENST00000312352 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
PFKM-201ENST00000312352 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
PFKM-201ENST00000312352 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
PFKM-201ENST00000312352 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
PFKM-201ENST00000312352 NEBP20929 6669 aa3.02□□□□□ -1.93
PFKM-201ENST00000312352 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
PFKM-201ENST00000312352 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
PFKM-201ENST00000312352 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
PFKM-201ENST00000312352 SPRR2DP22532 72 aa2.9□□□□□ -1.95
PFKM-201ENST00000312352 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
PFKM-201ENST00000312352 SPRR2EP22531 72 aa2.85□□□□□ -1.95
PFKM-201ENST00000312352 SPRR2AP35326 72 aa2.84□□□□□ -1.95
PFKM-201ENST00000312352 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
PFKM-201ENST00000312352 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
PFKM-201ENST00000312352 SPRR2BP35325 72 aa2.76□□□□□ -1.97
PFKM-201ENST00000312352 MT3P25713 68 aa2.63□□□□□ -1.99
PFKM-201ENST00000312352 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
PFKM-201ENST00000312352 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
PFKM-201ENST00000312352 MUC5ACP98088 5654 aa2.57□□□□□ -2
PFKM-201ENST00000312352 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
PFKM-201ENST00000312352 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
PFKM-201ENST00000312352 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
PFKM-201ENST00000312352 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
PFKM-201ENST00000312352 MT4P47944 62 aa2.41□□□□□ -2.02
PFKM-201ENST00000312352 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
PFKM-201ENST00000312352 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
PFKM-201ENST00000312352 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PFKM-201ENST00000312352 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
PFKM-201ENST00000312352 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
PFKM-201ENST00000312352 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
PFKM-201ENST00000312352 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
PFKM-201ENST00000312352 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
PFKM-201ENST00000312352 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PFKM-201ENST00000312352 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
PFKM-201ENST00000312352 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PFKM-201ENST00000312352 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
PFKM-201ENST00000312352 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
PFKM-201ENST00000312352 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
PFKM-201ENST00000312352 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 150.3 ms