RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 LCE2AQ5TA79 106 aaPredicted RBP2.32□□□□□ -2.04
GAPVD1-203ENST00000312123 MT1EP04732 61 aa2.31□□□□□ -2.04
GAPVD1-203ENST00000312123 DSTQ03001 7570 aaKnown RBP2.3□□□□□ -2.04
GAPVD1-203ENST00000312123 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
GAPVD1-203ENST00000312123 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
GAPVD1-203ENST00000312123 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
GAPVD1-203ENST00000312123 KRTAP9-6A0A140TA67 174 aa2.29□□□□□ -2.04
GAPVD1-203ENST00000312123 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
GAPVD1-203ENST00000312123 SPRR2DP22532 72 aa2.28□□□□□ -2.04
GAPVD1-203ENST00000312123 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
GAPVD1-203ENST00000312123 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
GAPVD1-203ENST00000312123 MT1MQ8N339 61 aa2.22□□□□□ -2.05
GAPVD1-203ENST00000312123 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
GAPVD1-203ENST00000312123 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
GAPVD1-203ENST00000312123 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
GAPVD1-203ENST00000312123 USH2AO75445 5202 aa2.18□□□□□ -2.06
GAPVD1-203ENST00000312123 KRTAP19-6Q3LI70 58 aa2.17□□□□□ -2.06
GAPVD1-203ENST00000312123 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
GAPVD1-203ENST00000312123 KRTAP4-9Q9BYQ8 210 aa2.15□□□□□ -2.07
GAPVD1-203ENST00000312123 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
GAPVD1-203ENST00000312123 KMT2DO14686 5537 aa2.11□□□□□ -2.07
GAPVD1-203ENST00000312123 PRM1P04553 51 aa2.11□□□□□ -2.07
GAPVD1-203ENST00000312123 MT4P47944 62 aa2.1□□□□□ -2.07
GAPVD1-203ENST00000312123 MT3P25713 68 aa2.09□□□□□ -2.08
GAPVD1-203ENST00000312123 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
GAPVD1-203ENST00000312123 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
GAPVD1-203ENST00000312123 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
GAPVD1-203ENST00000312123 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
GAPVD1-203ENST00000312123 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
GAPVD1-203ENST00000312123 MT1AP04731 61 aa2.03□□□□□ -2.09
GAPVD1-203ENST00000312123 LCE1DQ5T752 114 aa2.03□□□□□ -2.09
GAPVD1-203ENST00000312123 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
GAPVD1-203ENST00000312123 KRTAP9-7A8MTY7 169 aa2.01□□□□□ -2.09
GAPVD1-203ENST00000312123 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
GAPVD1-203ENST00000312123 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
GAPVD1-203ENST00000312123 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.95□□□□□ -2.1
GAPVD1-203ENST00000312123 LCE5AQ5TCM9 118 aa1.95□□□□□ -2.1
GAPVD1-203ENST00000312123 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
GAPVD1-203ENST00000312123 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
GAPVD1-203ENST00000312123 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
GAPVD1-203ENST00000312123 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
GAPVD1-203ENST00000312123 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
GAPVD1-203ENST00000312123 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
GAPVD1-203ENST00000312123 KRTAP9-4Q9BYQ2 154 aa1.85□□□□□ -2.11
GAPVD1-203ENST00000312123 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
GAPVD1-203ENST00000312123 LCE4AQ5TA78 99 aa1.71□□□□□ -2.14
GAPVD1-203ENST00000312123 KRTAP2-2Q9BYT5 123 aa1.71□□□□□ -2.14
GAPVD1-203ENST00000312123 NEBP20929 6669 aa1.7□□□□□ -2.14
GAPVD1-203ENST00000312123 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
GAPVD1-203ENST00000312123 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
GAPVD1-203ENST00000312123 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
GAPVD1-203ENST00000312123 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
GAPVD1-203ENST00000312123 KRTAP4-12Q9BQ66 201 aa1.64□□□□□ -2.15
GAPVD1-203ENST00000312123 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
GAPVD1-203ENST00000312123 KRTAP4-11Q9BYQ6 195 aa1.61□□□□□ -2.15
GAPVD1-203ENST00000312123 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
GAPVD1-203ENST00000312123 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
GAPVD1-203ENST00000312123 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
GAPVD1-203ENST00000312123 KRTAP5-5Q701N2 237 aaPredicted RBP1.54□□□□□ -2.16
GAPVD1-203ENST00000312123 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
GAPVD1-203ENST00000312123 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
GAPVD1-203ENST00000312123 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
GAPVD1-203ENST00000312123 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
GAPVD1-203ENST00000312123 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
GAPVD1-203ENST00000312123 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
GAPVD1-203ENST00000312123 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
GAPVD1-203ENST00000312123 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
GAPVD1-203ENST00000312123 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
GAPVD1-203ENST00000312123 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
GAPVD1-203ENST00000312123 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
GAPVD1-203ENST00000312123 KRTAP5-1Q6L8H4 278 aa1.15□□□□□ -2.22
GAPVD1-203ENST00000312123 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
GAPVD1-203ENST00000312123 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
GAPVD1-203ENST00000312123 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
GAPVD1-203ENST00000312123 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
GAPVD1-203ENST00000312123 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
GAPVD1-203ENST00000312123 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms