RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
GABRB3-202ENST00000311550 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
GABRB3-202ENST00000311550 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
GABRB3-202ENST00000311550 MT1MQ8N339 61 aa5.44□□□□□ -1.54
GABRB3-202ENST00000311550 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
GABRB3-202ENST00000311550 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.54
GABRB3-202ENST00000311550 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
GABRB3-202ENST00000311550 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
GABRB3-202ENST00000311550 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
GABRB3-202ENST00000311550 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
GABRB3-202ENST00000311550 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
GABRB3-202ENST00000311550 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
GABRB3-202ENST00000311550 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
GABRB3-202ENST00000311550 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
GABRB3-202ENST00000311550 PRM1P04553 51 aa5.09□□□□□ -1.59
GABRB3-202ENST00000311550 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
GABRB3-202ENST00000311550 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
GABRB3-202ENST00000311550 MT3P25713 68 aa5.04□□□□□ -1.6
GABRB3-202ENST00000311550 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
GABRB3-202ENST00000311550 MT1AP04731 61 aa4.98□□□□□ -1.61
GABRB3-202ENST00000311550 MT4P47944 62 aa4.98□□□□□ -1.61
GABRB3-202ENST00000311550 KMT2DO14686 5537 aa4.98□□□□□ -1.61
GABRB3-202ENST00000311550 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
GABRB3-202ENST00000311550 USH2AO75445 5202 aa4.94□□□□□ -1.62
GABRB3-202ENST00000311550 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
GABRB3-202ENST00000311550 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
GABRB3-202ENST00000311550 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
GABRB3-202ENST00000311550 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
GABRB3-202ENST00000311550 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
GABRB3-202ENST00000311550 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
GABRB3-202ENST00000311550 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
GABRB3-202ENST00000311550 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
GABRB3-202ENST00000311550 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
GABRB3-202ENST00000311550 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.68
GABRB3-202ENST00000311550 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
GABRB3-202ENST00000311550 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
GABRB3-202ENST00000311550 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
GABRB3-202ENST00000311550 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.69
GABRB3-202ENST00000311550 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
GABRB3-202ENST00000311550 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
GABRB3-202ENST00000311550 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
GABRB3-202ENST00000311550 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
GABRB3-202ENST00000311550 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
GABRB3-202ENST00000311550 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
GABRB3-202ENST00000311550 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
GABRB3-202ENST00000311550 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
GABRB3-202ENST00000311550 NEBP20929 6669 aa3.93□□□□□ -1.78
GABRB3-202ENST00000311550 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
GABRB3-202ENST00000311550 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
GABRB3-202ENST00000311550 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
GABRB3-202ENST00000311550 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
GABRB3-202ENST00000311550 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
GABRB3-202ENST00000311550 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
GABRB3-202ENST00000311550 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
GABRB3-202ENST00000311550 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
GABRB3-202ENST00000311550 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
GABRB3-202ENST00000311550 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
GABRB3-202ENST00000311550 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
GABRB3-202ENST00000311550 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
GABRB3-202ENST00000311550 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
GABRB3-202ENST00000311550 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
GABRB3-202ENST00000311550 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
GABRB3-202ENST00000311550 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
GABRB3-202ENST00000311550 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
GABRB3-202ENST00000311550 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
GABRB3-202ENST00000311550 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
GABRB3-202ENST00000311550 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
GABRB3-202ENST00000311550 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
GABRB3-202ENST00000311550 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
GABRB3-202ENST00000311550 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
GABRB3-202ENST00000311550 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
GABRB3-202ENST00000311550 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
GABRB3-202ENST00000311550 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
GABRB3-202ENST00000311550 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
GABRB3-202ENST00000311550 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
GABRB3-202ENST00000311550 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
GABRB3-202ENST00000311550 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 19.5 ms