RNA–Protein interactions for RNA: ENST00000310522.5

TRPV1-201, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-201ENST00000310522 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
TRPV1-201ENST00000310522 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
TRPV1-201ENST00000310522 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
TRPV1-201ENST00000310522 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
TRPV1-201ENST00000310522 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
TRPV1-201ENST00000310522 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
TRPV1-201ENST00000310522 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
TRPV1-201ENST00000310522 MT1MQ8N339 61 aa4.56□□□□□ -1.68
TRPV1-201ENST00000310522 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
TRPV1-201ENST00000310522 MT1GP13640 62 aa4.54□□□□□ -1.68
TRPV1-201ENST00000310522 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
TRPV1-201ENST00000310522 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
TRPV1-201ENST00000310522 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
TRPV1-201ENST00000310522 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
TRPV1-201ENST00000310522 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
TRPV1-201ENST00000310522 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
TRPV1-201ENST00000310522 SPRR2EP22531 72 aa4.39□□□□□ -1.71
TRPV1-201ENST00000310522 SPRR2BP35325 72 aa4.39□□□□□ -1.71
TRPV1-201ENST00000310522 SPRR2AP35326 72 aa4.39□□□□□ -1.71
TRPV1-201ENST00000310522 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
TRPV1-201ENST00000310522 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TRPV1-201ENST00000310522 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
TRPV1-201ENST00000310522 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
TRPV1-201ENST00000310522 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
TRPV1-201ENST00000310522 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
TRPV1-201ENST00000310522 SPRR2DP22532 72 aa4.21□□□□□ -1.74
TRPV1-201ENST00000310522 NEBP20929 6669 aa4.17□□□□□ -1.74
TRPV1-201ENST00000310522 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
TRPV1-201ENST00000310522 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
TRPV1-201ENST00000310522 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
TRPV1-201ENST00000310522 MT1AP04731 61 aa4.01□□□□□ -1.77
TRPV1-201ENST00000310522 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
TRPV1-201ENST00000310522 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
TRPV1-201ENST00000310522 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
TRPV1-201ENST00000310522 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
TRPV1-201ENST00000310522 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
TRPV1-201ENST00000310522 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
TRPV1-201ENST00000310522 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
TRPV1-201ENST00000310522 MT4P47944 62 aa3.71□□□□□ -1.82
TRPV1-201ENST00000310522 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
TRPV1-201ENST00000310522 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
TRPV1-201ENST00000310522 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
TRPV1-201ENST00000310522 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
TRPV1-201ENST00000310522 MT3P25713 68 aa3.6□□□□□ -1.83
TRPV1-201ENST00000310522 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
TRPV1-201ENST00000310522 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
TRPV1-201ENST00000310522 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
TRPV1-201ENST00000310522 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
TRPV1-201ENST00000310522 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
TRPV1-201ENST00000310522 PRM1P04553 51 aa3.47□□□□□ -1.85
TRPV1-201ENST00000310522 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
TRPV1-201ENST00000310522 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
TRPV1-201ENST00000310522 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TRPV1-201ENST00000310522 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
TRPV1-201ENST00000310522 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
TRPV1-201ENST00000310522 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
TRPV1-201ENST00000310522 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
TRPV1-201ENST00000310522 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
TRPV1-201ENST00000310522 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TRPV1-201ENST00000310522 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TRPV1-201ENST00000310522 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
TRPV1-201ENST00000310522 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
TRPV1-201ENST00000310522 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
TRPV1-201ENST00000310522 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
TRPV1-201ENST00000310522 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TRPV1-201ENST00000310522 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
TRPV1-201ENST00000310522 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TRPV1-201ENST00000310522 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
TRPV1-201ENST00000310522 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
TRPV1-201ENST00000310522 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
TRPV1-201ENST00000310522 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
TRPV1-201ENST00000310522 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
TRPV1-201ENST00000310522 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
TRPV1-201ENST00000310522 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
TRPV1-201ENST00000310522 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
TRPV1-201ENST00000310522 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
TRPV1-201ENST00000310522 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms