RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
SNCB-201ENST00000310112 MT1MQ8N339 61 aa8.01□□□□□ -1.13
SNCB-201ENST00000310112 KRTAP4-7Q9BYR0 210 aa8.01□□□□□ -1.13
SNCB-201ENST00000310112 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
SNCB-201ENST00000310112 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
SNCB-201ENST00000310112 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
SNCB-201ENST00000310112 KRTAP9-6A8MVA2 160 aa7.87□□□□□ -1.15
SNCB-201ENST00000310112 KRTAP6-3Q3LI67 103 aa7.87□□□□□ -1.15
SNCB-201ENST00000310112 LCE1AQ5T7P2 110 aa7.81□□□□□ -1.16
SNCB-201ENST00000310112 MUC12Q9UKN1 5478 aa7.8□□□□□ -1.16
SNCB-201ENST00000310112 KRTAP9-7A8MTY7 169 aa7.77□□□□□ -1.17
SNCB-201ENST00000310112 KRTAP4-3Q9BYR4 195 aa7.74□□□□□ -1.17
SNCB-201ENST00000310112 SPRR2EP22531 72 aa7.72□□□□□ -1.17
SNCB-201ENST00000310112 SPRR2BP35325 72 aa7.72□□□□□ -1.17
SNCB-201ENST00000310112 SPRR2AP35326 72 aa7.72□□□□□ -1.17
SNCB-201ENST00000310112 H3BS24 57 aa7.66□□□□□ -1.18
SNCB-201ENST00000310112 SYNE2Q8WXH0 6885 aaKnown RBP7.63□□□□□ -1.19
SNCB-201ENST00000310112 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
SNCB-201ENST00000310112 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
SNCB-201ENST00000310112 KRTAP2-3P0C7H8 128 aa7.47□□□□□ -1.21
SNCB-201ENST00000310112 KRTAP2-4Q9BYR9 128 aa7.47□□□□□ -1.21
SNCB-201ENST00000310112 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
SNCB-201ENST00000310112 SPRR2DP22532 72 aa7.46□□□□□ -1.22
SNCB-201ENST00000310112 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
SNCB-201ENST00000310112 KRTAP5-5Q701N2 237 aaPredicted RBP7.2□□□□□ -1.26
SNCB-201ENST00000310112 MT1AP04731 61 aa7.17□□□□□ -1.26
SNCB-201ENST00000310112 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
SNCB-201ENST00000310112 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
SNCB-201ENST00000310112 INE1O15225 51 aa7.06□□□□□ -1.28
SNCB-201ENST00000310112 NEBP20929 6669 aa7.05□□□□□ -1.28
SNCB-201ENST00000310112 KRTAP6-1Q3LI64 71 aa7.02□□□□□ -1.29
SNCB-201ENST00000310112 KRTAP5-4Q6L8H1 288 aa6.82□□□□□ -1.32
SNCB-201ENST00000310112 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
SNCB-201ENST00000310112 KRTAP20-1Q3LI63 56 aa6.74□□□□□ -1.33
SNCB-201ENST00000310112 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.33
SNCB-201ENST00000310112 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
SNCB-201ENST00000310112 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
SNCB-201ENST00000310112 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
SNCB-201ENST00000310112 MT3P25713 68 aa6.51□□□□□ -1.37
SNCB-201ENST00000310112 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
SNCB-201ENST00000310112 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
SNCB-201ENST00000310112 MT4P47944 62 aa6.39□□□□□ -1.39
SNCB-201ENST00000310112 LCE3DQ9BYE3 92 aa6.37□□□□□ -1.39
SNCB-201ENST00000310112 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
SNCB-201ENST00000310112 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
SNCB-201ENST00000310112 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
SNCB-201ENST00000310112 LCE3EQ5T5B0 92 aa6.23□□□□□ -1.41
SNCB-201ENST00000310112 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
SNCB-201ENST00000310112 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
SNCB-201ENST00000310112 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
SNCB-201ENST00000310112 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
SNCB-201ENST00000310112 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
SNCB-201ENST00000310112 LCE1EQ5T753 118 aa5.63□□□□□ -1.51
SNCB-201ENST00000310112 PRM1P04553 51 aa5.46□□□□□ -1.54
SNCB-201ENST00000310112 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
SNCB-201ENST00000310112 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.55
SNCB-201ENST00000310112 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
SNCB-201ENST00000310112 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
SNCB-201ENST00000310112 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
SNCB-201ENST00000310112 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
SNCB-201ENST00000310112 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
SNCB-201ENST00000310112 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
SNCB-201ENST00000310112 LCE1CQ5T751 118 aa5.22□□□□□ -1.57
SNCB-201ENST00000310112 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
SNCB-201ENST00000310112 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
SNCB-201ENST00000310112 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
SNCB-201ENST00000310112 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
SNCB-201ENST00000310112 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
SNCB-201ENST00000310112 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
SNCB-201ENST00000310112 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
SNCB-201ENST00000310112 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
SNCB-201ENST00000310112 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
SNCB-201ENST00000310112 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
SNCB-201ENST00000310112 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
SNCB-201ENST00000310112 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
SNCB-201ENST00000310112 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SNCB-201ENST00000310112 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms