RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
ATG4D-201ENST00000309469 KRTAP19-3Q7Z4W3 81 aa7.28□□□□□ -1.24
ATG4D-201ENST00000309469 MT1GP13640 62 aa7.23□□□□□ -1.25
ATG4D-201ENST00000309469 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
ATG4D-201ENST00000309469 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.26
ATG4D-201ENST00000309469 MT1MQ8N339 61 aa7.17□□□□□ -1.26
ATG4D-201ENST00000309469 INE1O15225 51 aa7.13□□□□□ -1.27
ATG4D-201ENST00000309469 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
ATG4D-201ENST00000309469 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
ATG4D-201ENST00000309469 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
ATG4D-201ENST00000309469 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
ATG4D-201ENST00000309469 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
ATG4D-201ENST00000309469 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
ATG4D-201ENST00000309469 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
ATG4D-201ENST00000309469 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
ATG4D-201ENST00000309469 KRTAP6-3Q3LI67 103 aa6.85□□□□□ -1.31
ATG4D-201ENST00000309469 SPRR2EP22531 72 aa6.84□□□□□ -1.31
ATG4D-201ENST00000309469 SPRR2BP35325 72 aa6.84□□□□□ -1.31
ATG4D-201ENST00000309469 SPRR2AP35326 72 aa6.84□□□□□ -1.31
ATG4D-201ENST00000309469 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
ATG4D-201ENST00000309469 KRTAP2-3P0C7H8 128 aa6.79□□□□□ -1.32
ATG4D-201ENST00000309469 KRTAP2-4Q9BYR9 128 aa6.79□□□□□ -1.32
ATG4D-201ENST00000309469 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
ATG4D-201ENST00000309469 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
ATG4D-201ENST00000309469 SPRR2DP22532 72 aa6.58□□□□□ -1.36
ATG4D-201ENST00000309469 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
ATG4D-201ENST00000309469 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
ATG4D-201ENST00000309469 MT1AP04731 61 aa6.37□□□□□ -1.39
ATG4D-201ENST00000309469 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
ATG4D-201ENST00000309469 NEBP20929 6669 aa6.33□□□□□ -1.4
ATG4D-201ENST00000309469 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
ATG4D-201ENST00000309469 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
ATG4D-201ENST00000309469 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
ATG4D-201ENST00000309469 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
ATG4D-201ENST00000309469 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
ATG4D-201ENST00000309469 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
ATG4D-201ENST00000309469 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
ATG4D-201ENST00000309469 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
ATG4D-201ENST00000309469 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
ATG4D-201ENST00000309469 MT3P25713 68 aa5.77□□□□□ -1.49
ATG4D-201ENST00000309469 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
ATG4D-201ENST00000309469 MT4P47944 62 aa5.74□□□□□ -1.49
ATG4D-201ENST00000309469 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
ATG4D-201ENST00000309469 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
ATG4D-201ENST00000309469 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
ATG4D-201ENST00000309469 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
ATG4D-201ENST00000309469 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
ATG4D-201ENST00000309469 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
ATG4D-201ENST00000309469 HMCN1Q96RW7 5635 aa5.47□□□□□ -1.53
ATG4D-201ENST00000309469 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
ATG4D-201ENST00000309469 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
ATG4D-201ENST00000309469 PRM1P04553 51 aa5.12□□□□□ -1.59
ATG4D-201ENST00000309469 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
ATG4D-201ENST00000309469 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
ATG4D-201ENST00000309469 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
ATG4D-201ENST00000309469 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
ATG4D-201ENST00000309469 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
ATG4D-201ENST00000309469 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
ATG4D-201ENST00000309469 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
ATG4D-201ENST00000309469 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
ATG4D-201ENST00000309469 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
ATG4D-201ENST00000309469 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
ATG4D-201ENST00000309469 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
ATG4D-201ENST00000309469 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
ATG4D-201ENST00000309469 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
ATG4D-201ENST00000309469 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
ATG4D-201ENST00000309469 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
ATG4D-201ENST00000309469 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
ATG4D-201ENST00000309469 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
ATG4D-201ENST00000309469 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
ATG4D-201ENST00000309469 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
ATG4D-201ENST00000309469 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
ATG4D-201ENST00000309469 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
ATG4D-201ENST00000309469 PHGR1C9JFL3 82 aa3.46□□□□□ -1.85
ATG4D-201ENST00000309469 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
ATG4D-201ENST00000309469 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
ATG4D-201ENST00000309469 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 76.9 ms