RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
ATP2A2-201ENST00000308664 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
ATP2A2-201ENST00000308664 MT1LQ93083 61 aa5.93□□□□□ -1.46
ATP2A2-201ENST00000308664 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
ATP2A2-201ENST00000308664 MT1EP04732 61 aa5.91□□□□□ -1.46
ATP2A2-201ENST00000308664 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
ATP2A2-201ENST00000308664 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
ATP2A2-201ENST00000308664 LCE3DQ9BYE3 92 aa5.83□□□□□ -1.48
ATP2A2-201ENST00000308664 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
ATP2A2-201ENST00000308664 USH2AO75445 5202 aa5.82□□□□□ -1.48
ATP2A2-201ENST00000308664 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
ATP2A2-201ENST00000308664 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
ATP2A2-201ENST00000308664 LCE3EQ5T5B0 92 aa5.75□□□□□ -1.49
ATP2A2-201ENST00000308664 MT1MQ8N339 61 aa5.71□□□□□ -1.49
ATP2A2-201ENST00000308664 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
ATP2A2-201ENST00000308664 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
ATP2A2-201ENST00000308664 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
ATP2A2-201ENST00000308664 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
ATP2A2-201ENST00000308664 KMT2DO14686 5537 aa5.61□□□□□ -1.51
ATP2A2-201ENST00000308664 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
ATP2A2-201ENST00000308664 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
ATP2A2-201ENST00000308664 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
ATP2A2-201ENST00000308664 MT4P47944 62 aa5.59□□□□□ -1.51
ATP2A2-201ENST00000308664 PRM1P04553 51 aa5.51□□□□□ -1.53
ATP2A2-201ENST00000308664 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
ATP2A2-201ENST00000308664 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
ATP2A2-201ENST00000308664 MT3P25713 68 aa5.34□□□□□ -1.56
ATP2A2-201ENST00000308664 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
ATP2A2-201ENST00000308664 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
ATP2A2-201ENST00000308664 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
ATP2A2-201ENST00000308664 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
ATP2A2-201ENST00000308664 MT1AP04731 61 aa5.17□□□□□ -1.58
ATP2A2-201ENST00000308664 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
ATP2A2-201ENST00000308664 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
ATP2A2-201ENST00000308664 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
ATP2A2-201ENST00000308664 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
ATP2A2-201ENST00000308664 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.6
ATP2A2-201ENST00000308664 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
ATP2A2-201ENST00000308664 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
ATP2A2-201ENST00000308664 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
ATP2A2-201ENST00000308664 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
ATP2A2-201ENST00000308664 MUC19Q7Z5P9 8384 aa4.89□□□□□ -1.63
ATP2A2-201ENST00000308664 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
ATP2A2-201ENST00000308664 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
ATP2A2-201ENST00000308664 NEBP20929 6669 aa4.7□□□□□ -1.66
ATP2A2-201ENST00000308664 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
ATP2A2-201ENST00000308664 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
ATP2A2-201ENST00000308664 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
ATP2A2-201ENST00000308664 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
ATP2A2-201ENST00000308664 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
ATP2A2-201ENST00000308664 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
ATP2A2-201ENST00000308664 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
ATP2A2-201ENST00000308664 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
ATP2A2-201ENST00000308664 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
ATP2A2-201ENST00000308664 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
ATP2A2-201ENST00000308664 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
ATP2A2-201ENST00000308664 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
ATP2A2-201ENST00000308664 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
ATP2A2-201ENST00000308664 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
ATP2A2-201ENST00000308664 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
ATP2A2-201ENST00000308664 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
ATP2A2-201ENST00000308664 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
ATP2A2-201ENST00000308664 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
ATP2A2-201ENST00000308664 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
ATP2A2-201ENST00000308664 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
ATP2A2-201ENST00000308664 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
ATP2A2-201ENST00000308664 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
ATP2A2-201ENST00000308664 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
ATP2A2-201ENST00000308664 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
ATP2A2-201ENST00000308664 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
ATP2A2-201ENST00000308664 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
ATP2A2-201ENST00000308664 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
ATP2A2-201ENST00000308664 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
ATP2A2-201ENST00000308664 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
ATP2A2-201ENST00000308664 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
ATP2A2-201ENST00000308664 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
ATP2A2-201ENST00000308664 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms