RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
APOBEC3F-201ENST00000308521 KMT2DO14686 5537 aa4.08□□□□□ -1.76
APOBEC3F-201ENST00000308521 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
APOBEC3F-201ENST00000308521 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
APOBEC3F-201ENST00000308521 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
APOBEC3F-201ENST00000308521 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
APOBEC3F-201ENST00000308521 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
APOBEC3F-201ENST00000308521 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
APOBEC3F-201ENST00000308521 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
APOBEC3F-201ENST00000308521 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
APOBEC3F-201ENST00000308521 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
APOBEC3F-201ENST00000308521 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
APOBEC3F-201ENST00000308521 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
APOBEC3F-201ENST00000308521 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
APOBEC3F-201ENST00000308521 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
APOBEC3F-201ENST00000308521 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
APOBEC3F-201ENST00000308521 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
APOBEC3F-201ENST00000308521 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
APOBEC3F-201ENST00000308521 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
APOBEC3F-201ENST00000308521 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
APOBEC3F-201ENST00000308521 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
APOBEC3F-201ENST00000308521 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
APOBEC3F-201ENST00000308521 MT1EP04732 61 aa3.6□□□□□ -1.83
APOBEC3F-201ENST00000308521 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
APOBEC3F-201ENST00000308521 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
APOBEC3F-201ENST00000308521 MT1LQ93083 61 aa3.54□□□□□ -1.84
APOBEC3F-201ENST00000308521 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
APOBEC3F-201ENST00000308521 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
APOBEC3F-201ENST00000308521 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
APOBEC3F-201ENST00000308521 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
APOBEC3F-201ENST00000308521 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
APOBEC3F-201ENST00000308521 MT3P25713 68 aa3.43□□□□□ -1.86
APOBEC3F-201ENST00000308521 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
APOBEC3F-201ENST00000308521 MT1MQ8N339 61 aa3.39□□□□□ -1.87
APOBEC3F-201ENST00000308521 MT1GP13640 62 aa3.38□□□□□ -1.87
APOBEC3F-201ENST00000308521 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
APOBEC3F-201ENST00000308521 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
APOBEC3F-201ENST00000308521 SPRR2EP22531 72 aa3.31□□□□□ -1.88
APOBEC3F-201ENST00000308521 SPRR2BP35325 72 aa3.31□□□□□ -1.88
APOBEC3F-201ENST00000308521 SPRR2AP35326 72 aa3.31□□□□□ -1.88
APOBEC3F-201ENST00000308521 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
APOBEC3F-201ENST00000308521 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
APOBEC3F-201ENST00000308521 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
APOBEC3F-201ENST00000308521 SPRR2DP22532 72 aa3.17□□□□□ -1.9
APOBEC3F-201ENST00000308521 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
APOBEC3F-201ENST00000308521 NEBP20929 6669 aa3.14□□□□□ -1.91
APOBEC3F-201ENST00000308521 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
APOBEC3F-201ENST00000308521 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
APOBEC3F-201ENST00000308521 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
APOBEC3F-201ENST00000308521 MT1AP04731 61 aa3.04□□□□□ -1.92
APOBEC3F-201ENST00000308521 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
APOBEC3F-201ENST00000308521 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
APOBEC3F-201ENST00000308521 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
APOBEC3F-201ENST00000308521 PRM1P04553 51 aa2.94□□□□□ -1.94
APOBEC3F-201ENST00000308521 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
APOBEC3F-201ENST00000308521 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
APOBEC3F-201ENST00000308521 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
APOBEC3F-201ENST00000308521 MT4P47944 62 aa2.84□□□□□ -1.96
APOBEC3F-201ENST00000308521 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
APOBEC3F-201ENST00000308521 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
APOBEC3F-201ENST00000308521 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
APOBEC3F-201ENST00000308521 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
APOBEC3F-201ENST00000308521 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
APOBEC3F-201ENST00000308521 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
APOBEC3F-201ENST00000308521 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
APOBEC3F-201ENST00000308521 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
APOBEC3F-201ENST00000308521 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
APOBEC3F-201ENST00000308521 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
APOBEC3F-201ENST00000308521 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
APOBEC3F-201ENST00000308521 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
APOBEC3F-201ENST00000308521 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
APOBEC3F-201ENST00000308521 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
APOBEC3F-201ENST00000308521 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
APOBEC3F-201ENST00000308521 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
APOBEC3F-201ENST00000308521 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
APOBEC3F-201ENST00000308521 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
APOBEC3F-201ENST00000308521 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 72.1 ms