RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 MT1GP13640 62 aa3.61□□□□□ -1.83
MUC4-201ENST00000308466 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
MUC4-201ENST00000308466 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
MUC4-201ENST00000308466 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
MUC4-201ENST00000308466 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
MUC4-201ENST00000308466 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
MUC4-201ENST00000308466 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
MUC4-201ENST00000308466 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
MUC4-201ENST00000308466 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
MUC4-201ENST00000308466 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
MUC4-201ENST00000308466 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
MUC4-201ENST00000308466 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
MUC4-201ENST00000308466 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
MUC4-201ENST00000308466 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
MUC4-201ENST00000308466 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
MUC4-201ENST00000308466 MT1MQ8N339 61 aa3.44□□□□□ -1.86
MUC4-201ENST00000308466 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
MUC4-201ENST00000308466 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
MUC4-201ENST00000308466 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
MUC4-201ENST00000308466 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
MUC4-201ENST00000308466 SPRR2EP22531 72 aa3.33□□□□□ -1.88
MUC4-201ENST00000308466 SPRR2BP35325 72 aa3.33□□□□□ -1.88
MUC4-201ENST00000308466 SPRR2AP35326 72 aa3.33□□□□□ -1.88
MUC4-201ENST00000308466 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
MUC4-201ENST00000308466 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
MUC4-201ENST00000308466 PRM1P04553 51 aa3.24□□□□□ -1.89
MUC4-201ENST00000308466 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
MUC4-201ENST00000308466 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
MUC4-201ENST00000308466 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
MUC4-201ENST00000308466 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
MUC4-201ENST00000308466 SPRR2DP22532 72 aa3.18□□□□□ -1.9
MUC4-201ENST00000308466 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
MUC4-201ENST00000308466 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
MUC4-201ENST00000308466 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
MUC4-201ENST00000308466 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
MUC4-201ENST00000308466 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
MUC4-201ENST00000308466 MT1AP04731 61 aa3.08□□□□□ -1.92
MUC4-201ENST00000308466 LCE1EQ5T753 118 aa3□□□□□ -1.93
MUC4-201ENST00000308466 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
MUC4-201ENST00000308466 MT3P25713 68 aa2.93□□□□□ -1.94
MUC4-201ENST00000308466 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
MUC4-201ENST00000308466 MT4P47944 62 aa2.89□□□□□ -1.95
MUC4-201ENST00000308466 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
MUC4-201ENST00000308466 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
MUC4-201ENST00000308466 NEBP20929 6669 aa2.87□□□□□ -1.95
MUC4-201ENST00000308466 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
MUC4-201ENST00000308466 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
MUC4-201ENST00000308466 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
MUC4-201ENST00000308466 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
MUC4-201ENST00000308466 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
MUC4-201ENST00000308466 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
MUC4-201ENST00000308466 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
MUC4-201ENST00000308466 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
MUC4-201ENST00000308466 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
MUC4-201ENST00000308466 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
MUC4-201ENST00000308466 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
MUC4-201ENST00000308466 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
MUC4-201ENST00000308466 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
MUC4-201ENST00000308466 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
MUC4-201ENST00000308466 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
MUC4-201ENST00000308466 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
MUC4-201ENST00000308466 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
MUC4-201ENST00000308466 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
MUC4-201ENST00000308466 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
MUC4-201ENST00000308466 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
MUC4-201ENST00000308466 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
MUC4-201ENST00000308466 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
MUC4-201ENST00000308466 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
MUC4-201ENST00000308466 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
MUC4-201ENST00000308466 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
MUC4-201ENST00000308466 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
MUC4-201ENST00000308466 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
MUC4-201ENST00000308466 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.13
MUC4-201ENST00000308466 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
MUC4-201ENST00000308466 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
MUC4-201ENST00000308466 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
MUC4-201ENST00000308466 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
MUC4-201ENST00000308466 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 88.9 ms