RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
SSH3-201ENST00000308127 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
SSH3-201ENST00000308127 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
SSH3-201ENST00000308127 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
SSH3-201ENST00000308127 MT1GP13640 62 aa5.49□□□□□ -1.53
SSH3-201ENST00000308127 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SSH3-201ENST00000308127 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
SSH3-201ENST00000308127 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
SSH3-201ENST00000308127 MT1MQ8N339 61 aa5.28□□□□□ -1.56
SSH3-201ENST00000308127 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
SSH3-201ENST00000308127 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
SSH3-201ENST00000308127 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
SSH3-201ENST00000308127 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
SSH3-201ENST00000308127 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
SSH3-201ENST00000308127 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
SSH3-201ENST00000308127 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
SSH3-201ENST00000308127 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
SSH3-201ENST00000308127 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
SSH3-201ENST00000308127 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
SSH3-201ENST00000308127 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
SSH3-201ENST00000308127 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
SSH3-201ENST00000308127 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
SSH3-201ENST00000308127 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
SSH3-201ENST00000308127 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
SSH3-201ENST00000308127 MT1AP04731 61 aa4.67□□□□□ -1.66
SSH3-201ENST00000308127 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
SSH3-201ENST00000308127 PRM1P04553 51 aa4.64□□□□□ -1.67
SSH3-201ENST00000308127 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
SSH3-201ENST00000308127 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SSH3-201ENST00000308127 SPRR2EP22531 72 aa4.56□□□□□ -1.68
SSH3-201ENST00000308127 SPRR2BP35325 72 aa4.56□□□□□ -1.68
SSH3-201ENST00000308127 SPRR2AP35326 72 aa4.56□□□□□ -1.68
SSH3-201ENST00000308127 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SSH3-201ENST00000308127 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
SSH3-201ENST00000308127 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
SSH3-201ENST00000308127 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SSH3-201ENST00000308127 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
SSH3-201ENST00000308127 MT3P25713 68 aa4.2□□□□□ -1.74
SSH3-201ENST00000308127 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
SSH3-201ENST00000308127 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
SSH3-201ENST00000308127 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
SSH3-201ENST00000308127 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SSH3-201ENST00000308127 MT4P47944 62 aa4□□□□□ -1.77
SSH3-201ENST00000308127 NEBP20929 6669 aa3.96□□□□□ -1.77
SSH3-201ENST00000308127 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
SSH3-201ENST00000308127 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SSH3-201ENST00000308127 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SSH3-201ENST00000308127 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
SSH3-201ENST00000308127 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
SSH3-201ENST00000308127 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SSH3-201ENST00000308127 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
SSH3-201ENST00000308127 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SSH3-201ENST00000308127 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
SSH3-201ENST00000308127 LCE1EQ5T753 118 aa3.53□□□□□ -1.85
SSH3-201ENST00000308127 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
SSH3-201ENST00000308127 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
SSH3-201ENST00000308127 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
SSH3-201ENST00000308127 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
SSH3-201ENST00000308127 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
SSH3-201ENST00000308127 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SSH3-201ENST00000308127 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
SSH3-201ENST00000308127 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
SSH3-201ENST00000308127 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.92
SSH3-201ENST00000308127 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
SSH3-201ENST00000308127 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SSH3-201ENST00000308127 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
SSH3-201ENST00000308127 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SSH3-201ENST00000308127 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
SSH3-201ENST00000308127 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SSH3-201ENST00000308127 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SSH3-201ENST00000308127 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
SSH3-201ENST00000308127 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SSH3-201ENST00000308127 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
SSH3-201ENST00000308127 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SSH3-201ENST00000308127 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
SSH3-201ENST00000308127 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
SSH3-201ENST00000308127 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 152.5 ms