RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
CCDC8-201ENST00000307522 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CCDC8-201ENST00000307522 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
CCDC8-201ENST00000307522 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
CCDC8-201ENST00000307522 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.53
CCDC8-201ENST00000307522 MDN1Q9NU22 5596 aa5.46□□□□□ -1.53
CCDC8-201ENST00000307522 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
CCDC8-201ENST00000307522 MT1EP04732 61 aa5.44□□□□□ -1.54
CCDC8-201ENST00000307522 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CCDC8-201ENST00000307522 MT1LQ93083 61 aa5.4□□□□□ -1.54
CCDC8-201ENST00000307522 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
CCDC8-201ENST00000307522 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
CCDC8-201ENST00000307522 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
CCDC8-201ENST00000307522 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
CCDC8-201ENST00000307522 MT1GP13640 62 aa5.28□□□□□ -1.56
CCDC8-201ENST00000307522 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
CCDC8-201ENST00000307522 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
CCDC8-201ENST00000307522 MT1MQ8N339 61 aa5.13□□□□□ -1.59
CCDC8-201ENST00000307522 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
CCDC8-201ENST00000307522 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
CCDC8-201ENST00000307522 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
CCDC8-201ENST00000307522 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
CCDC8-201ENST00000307522 SPRR2EP22531 72 aa4.93□□□□□ -1.62
CCDC8-201ENST00000307522 SPRR2BP35325 72 aa4.93□□□□□ -1.62
CCDC8-201ENST00000307522 SPRR2AP35326 72 aa4.93□□□□□ -1.62
CCDC8-201ENST00000307522 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CCDC8-201ENST00000307522 PRM1P04553 51 aa4.87□□□□□ -1.63
CCDC8-201ENST00000307522 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.64
CCDC8-201ENST00000307522 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
CCDC8-201ENST00000307522 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
CCDC8-201ENST00000307522 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
CCDC8-201ENST00000307522 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CCDC8-201ENST00000307522 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
CCDC8-201ENST00000307522 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CCDC8-201ENST00000307522 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
CCDC8-201ENST00000307522 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
CCDC8-201ENST00000307522 NEBP20929 6669 aa4.5□□□□□ -1.69
CCDC8-201ENST00000307522 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CCDC8-201ENST00000307522 MT1AP04731 61 aa4.47□□□□□ -1.69
CCDC8-201ENST00000307522 MT4P47944 62 aa4.37□□□□□ -1.71
CCDC8-201ENST00000307522 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
CCDC8-201ENST00000307522 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CCDC8-201ENST00000307522 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
CCDC8-201ENST00000307522 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
CCDC8-201ENST00000307522 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
CCDC8-201ENST00000307522 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
CCDC8-201ENST00000307522 MT3P25713 68 aa4.04□□□□□ -1.76
CCDC8-201ENST00000307522 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
CCDC8-201ENST00000307522 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
CCDC8-201ENST00000307522 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
CCDC8-201ENST00000307522 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
CCDC8-201ENST00000307522 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
CCDC8-201ENST00000307522 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
CCDC8-201ENST00000307522 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CCDC8-201ENST00000307522 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CCDC8-201ENST00000307522 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
CCDC8-201ENST00000307522 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
CCDC8-201ENST00000307522 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
CCDC8-201ENST00000307522 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CCDC8-201ENST00000307522 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
CCDC8-201ENST00000307522 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
CCDC8-201ENST00000307522 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
CCDC8-201ENST00000307522 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
CCDC8-201ENST00000307522 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CCDC8-201ENST00000307522 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
CCDC8-201ENST00000307522 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
CCDC8-201ENST00000307522 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
CCDC8-201ENST00000307522 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
CCDC8-201ENST00000307522 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CCDC8-201ENST00000307522 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
CCDC8-201ENST00000307522 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CCDC8-201ENST00000307522 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
CCDC8-201ENST00000307522 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CCDC8-201ENST00000307522 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CCDC8-201ENST00000307522 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CCDC8-201ENST00000307522 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
CCDC8-201ENST00000307522 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 146.1 ms