RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.77□□□□□ -1.97
CLCN5-201ENST00000307367 KMT2DO14686 5537 aa2.77□□□□□ -1.97
CLCN5-201ENST00000307367 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
CLCN5-201ENST00000307367 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CLCN5-201ENST00000307367 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
CLCN5-201ENST00000307367 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
CLCN5-201ENST00000307367 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
CLCN5-201ENST00000307367 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
CLCN5-201ENST00000307367 MT1EP04732 61 aa2.64□□□□□ -1.99
CLCN5-201ENST00000307367 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
CLCN5-201ENST00000307367 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
CLCN5-201ENST00000307367 MT1LQ93083 61 aa2.59□□□□□ -2
CLCN5-201ENST00000307367 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
CLCN5-201ENST00000307367 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
CLCN5-201ENST00000307367 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
CLCN5-201ENST00000307367 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CLCN5-201ENST00000307367 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
CLCN5-201ENST00000307367 MT1GP13640 62 aa2.53□□□□□ -2
CLCN5-201ENST00000307367 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
CLCN5-201ENST00000307367 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
CLCN5-201ENST00000307367 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
CLCN5-201ENST00000307367 MT1MQ8N339 61 aa2.49□□□□□ -2.01
CLCN5-201ENST00000307367 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
CLCN5-201ENST00000307367 SPRR2EP22531 72 aa2.47□□□□□ -2.01
CLCN5-201ENST00000307367 SPRR2BP35325 72 aa2.47□□□□□ -2.01
CLCN5-201ENST00000307367 SPRR2AP35326 72 aa2.47□□□□□ -2.01
CLCN5-201ENST00000307367 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
CLCN5-201ENST00000307367 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
CLCN5-201ENST00000307367 SPRR2DP22532 72 aa2.39□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
CLCN5-201ENST00000307367 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
CLCN5-201ENST00000307367 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
CLCN5-201ENST00000307367 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CLCN5-201ENST00000307367 NEBP20929 6669 aa2.31□□□□□ -2.04
CLCN5-201ENST00000307367 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
CLCN5-201ENST00000307367 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
CLCN5-201ENST00000307367 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
CLCN5-201ENST00000307367 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
CLCN5-201ENST00000307367 MT3P25713 68 aa2.24□□□□□ -2.05
CLCN5-201ENST00000307367 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
CLCN5-201ENST00000307367 MT1AP04731 61 aa2.2□□□□□ -2.06
CLCN5-201ENST00000307367 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
CLCN5-201ENST00000307367 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
CLCN5-201ENST00000307367 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
CLCN5-201ENST00000307367 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
CLCN5-201ENST00000307367 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
CLCN5-201ENST00000307367 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
CLCN5-201ENST00000307367 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
CLCN5-201ENST00000307367 MT4P47944 62 aa2.06□□□□□ -2.08
CLCN5-201ENST00000307367 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
CLCN5-201ENST00000307367 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
CLCN5-201ENST00000307367 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
CLCN5-201ENST00000307367 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
CLCN5-201ENST00000307367 PRM1P04553 51 aa1.95□□□□□ -2.1
CLCN5-201ENST00000307367 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
CLCN5-201ENST00000307367 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
CLCN5-201ENST00000307367 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
CLCN5-201ENST00000307367 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
CLCN5-201ENST00000307367 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CLCN5-201ENST00000307367 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.13
CLCN5-201ENST00000307367 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
CLCN5-201ENST00000307367 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
CLCN5-201ENST00000307367 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
CLCN5-201ENST00000307367 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
CLCN5-201ENST00000307367 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CLCN5-201ENST00000307367 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CLCN5-201ENST00000307367 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CLCN5-201ENST00000307367 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
CLCN5-201ENST00000307367 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CLCN5-201ENST00000307367 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CLCN5-201ENST00000307367 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
CLCN5-201ENST00000307367 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
CLCN5-201ENST00000307367 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 97.7 ms