RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 MT1LQ93083 61 aa3.8□□□□□ -1.8
PHTF2-203ENST00000307305 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
PHTF2-203ENST00000307305 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
PHTF2-203ENST00000307305 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PHTF2-203ENST00000307305 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PHTF2-203ENST00000307305 MT1EP04732 61 aa3.76□□□□□ -1.81
PHTF2-203ENST00000307305 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
PHTF2-203ENST00000307305 LCE2AQ5TA79 106 aaPredicted RBP3.69□□□□□ -1.82
PHTF2-203ENST00000307305 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
PHTF2-203ENST00000307305 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
PHTF2-203ENST00000307305 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
PHTF2-203ENST00000307305 MT1MQ8N339 61 aa3.58□□□□□ -1.84
PHTF2-203ENST00000307305 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
PHTF2-203ENST00000307305 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
PHTF2-203ENST00000307305 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
PHTF2-203ENST00000307305 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
PHTF2-203ENST00000307305 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
PHTF2-203ENST00000307305 SPRR2EP22531 72 aa3.46□□□□□ -1.86
PHTF2-203ENST00000307305 SPRR2BP35325 72 aa3.46□□□□□ -1.86
PHTF2-203ENST00000307305 SPRR2AP35326 72 aa3.46□□□□□ -1.86
PHTF2-203ENST00000307305 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
PHTF2-203ENST00000307305 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
PHTF2-203ENST00000307305 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
PHTF2-203ENST00000307305 PRM1P04553 51 aa3.32□□□□□ -1.88
PHTF2-203ENST00000307305 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
PHTF2-203ENST00000307305 SPRR2DP22532 72 aa3.28□□□□□ -1.88
PHTF2-203ENST00000307305 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
PHTF2-203ENST00000307305 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
PHTF2-203ENST00000307305 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
PHTF2-203ENST00000307305 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
PHTF2-203ENST00000307305 MT1AP04731 61 aa3.18□□□□□ -1.9
PHTF2-203ENST00000307305 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
PHTF2-203ENST00000307305 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
PHTF2-203ENST00000307305 MT4P47944 62 aa3.1□□□□□ -1.91
PHTF2-203ENST00000307305 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
PHTF2-203ENST00000307305 MT3P25713 68 aa3.07□□□□□ -1.92
PHTF2-203ENST00000307305 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
PHTF2-203ENST00000307305 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
PHTF2-203ENST00000307305 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
PHTF2-203ENST00000307305 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
PHTF2-203ENST00000307305 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
PHTF2-203ENST00000307305 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
PHTF2-203ENST00000307305 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
PHTF2-203ENST00000307305 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
PHTF2-203ENST00000307305 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
PHTF2-203ENST00000307305 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PHTF2-203ENST00000307305 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
PHTF2-203ENST00000307305 NEBP20929 6669 aa2.61□□□□□ -1.99
PHTF2-203ENST00000307305 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
PHTF2-203ENST00000307305 MUC5ACP98088 5654 aa2.58□□□□□ -2
PHTF2-203ENST00000307305 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
PHTF2-203ENST00000307305 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
PHTF2-203ENST00000307305 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
PHTF2-203ENST00000307305 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
PHTF2-203ENST00000307305 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
PHTF2-203ENST00000307305 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
PHTF2-203ENST00000307305 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
PHTF2-203ENST00000307305 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PHTF2-203ENST00000307305 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
PHTF2-203ENST00000307305 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
PHTF2-203ENST00000307305 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
PHTF2-203ENST00000307305 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
PHTF2-203ENST00000307305 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
PHTF2-203ENST00000307305 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
PHTF2-203ENST00000307305 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
PHTF2-203ENST00000307305 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
PHTF2-203ENST00000307305 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
PHTF2-203ENST00000307305 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
PHTF2-203ENST00000307305 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
PHTF2-203ENST00000307305 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
PHTF2-203ENST00000307305 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
PHTF2-203ENST00000307305 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
PHTF2-203ENST00000307305 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
PHTF2-203ENST00000307305 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
PHTF2-203ENST00000307305 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
PHTF2-203ENST00000307305 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PHTF2-203ENST00000307305 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms