RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PP632Q6XCG6 107 aa9.85□□□□□ -0.83
HDAC3-201ENST00000305264 KRTAP19-3Q7Z4W3 81 aa9.74□□□□□ -0.85
HDAC3-201ENST00000305264 MT1LQ93083 61 aa9.71□□□□□ -0.86
HDAC3-201ENST00000305264 LCE5AQ5TCM9 118 aa9.65□□□□□ -0.86
HDAC3-201ENST00000305264 SPRR2DP22532 72 aa9.57□□□□□ -0.88
HDAC3-201ENST00000305264 MT1GP13640 62 aa9.57□□□□□ -0.88
HDAC3-201ENST00000305264 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
HDAC3-201ENST00000305264 KRTAP15-1Q3LI76 137 aa9.52□□□□□ -0.89
HDAC3-201ENST00000305264 MT1MQ8N339 61 aa9.46□□□□□ -0.89
HDAC3-201ENST00000305264 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
HDAC3-201ENST00000305264 KRTAP4-7Q9BYR0 210 aa9.33□□□□□ -0.92
HDAC3-201ENST00000305264 KRTAP20-1Q3LI63 56 aa9.31□□□□□ -0.92
HDAC3-201ENST00000305264 KRTAP4-3Q9BYR4 195 aa9.28□□□□□ -0.92
HDAC3-201ENST00000305264 KRTAP2-3P0C7H8 128 aa9.26□□□□□ -0.93
HDAC3-201ENST00000305264 KRTAP2-4Q9BYR9 128 aa9.26□□□□□ -0.93
HDAC3-201ENST00000305264 DSTQ03001 7570 aaKnown RBP9.25□□□□□ -0.93
HDAC3-201ENST00000305264 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
HDAC3-201ENST00000305264 KRTAP19-4Q3LI73 84 aa9.24□□□□□ -0.93
HDAC3-201ENST00000305264 LCE3CQ5T5A8 94 aa9.19□□□□□ -0.94
HDAC3-201ENST00000305264 KRTAP2-2Q9BYT5 123 aa9.03□□□□□ -0.96
HDAC3-201ENST00000305264 KRTAP2-1Q9BYU5 128 aa9.03□□□□□ -0.96
HDAC3-201ENST00000305264 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
HDAC3-201ENST00000305264 LOC100996750A0A140TA64 210 aa8.8□□□□□ -1
HDAC3-201ENST00000305264 KRTAP9-6A8MVA2 160 aa8.72□□□□□ -1.01
HDAC3-201ENST00000305264 KRTAP5-5Q701N2 237 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-201ENST00000305264 KRTAP5-4Q6L8H1 288 aa8.51□□□□□ -1.05
HDAC3-201ENST00000305264 SPRR5A0A1B0GTR4 108 aa8.5□□□□□ -1.05
HDAC3-201ENST00000305264 LCE4AQ5TA78 99 aa8.46□□□□□ -1.05
HDAC3-201ENST00000305264 KRTAP4-9Q9BYQ8 210 aa8.42□□□□□ -1.06
HDAC3-201ENST00000305264 MT4P47944 62 aa8.33□□□□□ -1.08
HDAC3-201ENST00000305264 LCE1DQ5T752 114 aa8.31□□□□□ -1.08
HDAC3-201ENST00000305264 MT1AP04731 61 aa8.24□□□□□ -1.09
HDAC3-201ENST00000305264 HMCN1Q96RW7 5635 aa8.23□□□□□ -1.09
HDAC3-201ENST00000305264 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
HDAC3-201ENST00000305264 KRTAP6-1Q3LI64 71 aa8.19□□□□□ -1.1
HDAC3-201ENST00000305264 SYNE1Q8NF91 8797 aaKnown RBP8.17□□□□□ -1.1
HDAC3-201ENST00000305264 KRTAP12-4P60329 112 aa8.11□□□□□ -1.11
HDAC3-201ENST00000305264 KRTAP20-2Q3LI61 65 aa7.99□□□□□ -1.13
HDAC3-201ENST00000305264 KRTAP9-4Q9BYQ2 154 aa7.88□□□□□ -1.15
HDAC3-201ENST00000305264 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
HDAC3-201ENST00000305264 KRTAP5-3Q6L8H2 238 aa7.72□□□□□ -1.17
HDAC3-201ENST00000305264 KRTAP6-2Q3LI66 62 aa7.66□□□□□ -1.18
HDAC3-201ENST00000305264 KRTAP5-2Q701N4 177 aa7.61□□□□□ -1.19
HDAC3-201ENST00000305264 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
HDAC3-201ENST00000305264 MT3P25713 68 aa7.48□□□□□ -1.21
HDAC3-201ENST00000305264 GPR98Q8WXG9 6306 aa7.36□□□□□ -1.23
HDAC3-201ENST00000305264 KRTAP5-10Q6L8G5 202 aa7.27□□□□□ -1.25
HDAC3-201ENST00000305264 NDUFAF8A1L188 74 aa7.21□□□□□ -1.26
HDAC3-201ENST00000305264 OBSCNQ5VST9 7968 aa7.09□□□□□ -1.27
HDAC3-201ENST00000305264 KRTAP4-11Q9BYQ6 195 aa7.08□□□□□ -1.28
HDAC3-201ENST00000305264 KRTAP5-8O75690 187 aa6.84□□□□□ -1.32
HDAC3-201ENST00000305264 KRTAP5-7Q6L8G8 165 aa6.84□□□□□ -1.32
HDAC3-201ENST00000305264 LCE3DQ9BYE3 92 aa6.78□□□□□ -1.32
HDAC3-201ENST00000305264 KRTAP5-1Q6L8H4 278 aa6.68□□□□□ -1.34
HDAC3-201ENST00000305264 LCE1EQ5T753 118 aa6.65□□□□□ -1.34
HDAC3-201ENST00000305264 MUC5ACP98088 5654 aa6.53□□□□□ -1.36
HDAC3-201ENST00000305264 LCE3EQ5T5B0 92 aa6.51□□□□□ -1.37
HDAC3-201ENST00000305264 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
HDAC3-201ENST00000305264 KRTAP4-2Q9BYR5 136 aa6.27□□□□□ -1.41
HDAC3-201ENST00000305264 LCE1BQ5T7P3 118 aa6.26□□□□□ -1.41
HDAC3-201ENST00000305264 LCE1CQ5T751 118 aa6.19□□□□□ -1.42
HDAC3-201ENST00000305264 MUC5BQ9HC84 5762 aaPredicted RBP6.15□□□□□ -1.43
HDAC3-201ENST00000305264 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
HDAC3-201ENST00000305264 AHNAKQ09666 5890 aaKnown RBP5.96□□□□□ -1.45
HDAC3-201ENST00000305264 INE1O15225 51 aa5.86□□□□□ -1.47
HDAC3-201ENST00000305264 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-201ENST00000305264 KRTAP5-11Q6L8G4 156 aa5.54□□□□□ -1.52
HDAC3-201ENST00000305264 PRM1P04553 51 aa5.41□□□□□ -1.54
HDAC3-201ENST00000305264 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.55
HDAC3-201ENST00000305264 KRTAP21-2Q3LI59 83 aa5.38□□□□□ -1.55
HDAC3-201ENST00000305264 LCE1FQ5T754 118 aa5.13□□□□□ -1.59
HDAC3-201ENST00000305264 H3BS24 57 aa5.09□□□□□ -1.59
HDAC3-201ENST00000305264 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
HDAC3-201ENST00000305264 PHGR1C9JFL3 82 aa4.76□□□□□ -1.65
HDAC3-201ENST00000305264 MUC19Q7Z5P9 8384 aa4.3□□□□□ -1.72
HDAC3-201ENST00000305264 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
HDAC3-201ENST00000305264 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms