RNA–Protein interactions for RNA: ENST00000304858.6

HSPA4-201, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-201ENST00000304858 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
HSPA4-201ENST00000304858 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
HSPA4-201ENST00000304858 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
HSPA4-201ENST00000304858 KMT2DO14686 5537 aa4.07□□□□□ -1.76
HSPA4-201ENST00000304858 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
HSPA4-201ENST00000304858 MT1LQ93083 61 aa4.04□□□□□ -1.76
HSPA4-201ENST00000304858 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
HSPA4-201ENST00000304858 MT1EP04732 61 aa4.02□□□□□ -1.77
HSPA4-201ENST00000304858 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
HSPA4-201ENST00000304858 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
HSPA4-201ENST00000304858 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
HSPA4-201ENST00000304858 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
HSPA4-201ENST00000304858 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
HSPA4-201ENST00000304858 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
HSPA4-201ENST00000304858 MT4P47944 62 aa3.91□□□□□ -1.78
HSPA4-201ENST00000304858 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
HSPA4-201ENST00000304858 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
HSPA4-201ENST00000304858 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
HSPA4-201ENST00000304858 MT1MQ8N339 61 aa3.84□□□□□ -1.8
HSPA4-201ENST00000304858 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
HSPA4-201ENST00000304858 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
HSPA4-201ENST00000304858 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
HSPA4-201ENST00000304858 MT3P25713 68 aa3.79□□□□□ -1.8
HSPA4-201ENST00000304858 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
HSPA4-201ENST00000304858 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
HSPA4-201ENST00000304858 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
HSPA4-201ENST00000304858 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
HSPA4-201ENST00000304858 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
HSPA4-201ENST00000304858 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
HSPA4-201ENST00000304858 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
HSPA4-201ENST00000304858 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
HSPA4-201ENST00000304858 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
HSPA4-201ENST00000304858 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
HSPA4-201ENST00000304858 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
HSPA4-201ENST00000304858 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
HSPA4-201ENST00000304858 MT1AP04731 61 aa3.55□□□□□ -1.84
HSPA4-201ENST00000304858 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
HSPA4-201ENST00000304858 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
HSPA4-201ENST00000304858 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
HSPA4-201ENST00000304858 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
HSPA4-201ENST00000304858 PRM1P04553 51 aa3.43□□□□□ -1.86
HSPA4-201ENST00000304858 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
HSPA4-201ENST00000304858 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
HSPA4-201ENST00000304858 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
HSPA4-201ENST00000304858 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
HSPA4-201ENST00000304858 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
HSPA4-201ENST00000304858 NEBP20929 6669 aa3.23□□□□□ -1.89
HSPA4-201ENST00000304858 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
HSPA4-201ENST00000304858 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
HSPA4-201ENST00000304858 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
HSPA4-201ENST00000304858 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
HSPA4-201ENST00000304858 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
HSPA4-201ENST00000304858 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
HSPA4-201ENST00000304858 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
HSPA4-201ENST00000304858 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
HSPA4-201ENST00000304858 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
HSPA4-201ENST00000304858 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
HSPA4-201ENST00000304858 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
HSPA4-201ENST00000304858 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
HSPA4-201ENST00000304858 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
HSPA4-201ENST00000304858 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
HSPA4-201ENST00000304858 HMCN1Q96RW7 5635 aa2.53□□□□□ -2.01
HSPA4-201ENST00000304858 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
HSPA4-201ENST00000304858 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
HSPA4-201ENST00000304858 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
HSPA4-201ENST00000304858 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
HSPA4-201ENST00000304858 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
HSPA4-201ENST00000304858 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
HSPA4-201ENST00000304858 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
HSPA4-201ENST00000304858 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
HSPA4-201ENST00000304858 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
HSPA4-201ENST00000304858 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
HSPA4-201ENST00000304858 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
HSPA4-201ENST00000304858 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
HSPA4-201ENST00000304858 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
HSPA4-201ENST00000304858 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
HSPA4-201ENST00000304858 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 1722.9 ms