RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
RPAP1-201ENST00000304330 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.81
RPAP1-201ENST00000304330 MT1MQ8N339 61 aa3.71□□□□□ -1.82
RPAP1-201ENST00000304330 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
RPAP1-201ENST00000304330 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
RPAP1-201ENST00000304330 SPRR2DP22532 72 aa3.67□□□□□ -1.82
RPAP1-201ENST00000304330 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
RPAP1-201ENST00000304330 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
RPAP1-201ENST00000304330 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
RPAP1-201ENST00000304330 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
RPAP1-201ENST00000304330 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.82
RPAP1-201ENST00000304330 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
RPAP1-201ENST00000304330 USH2AO75445 5202 aa3.59□□□□□ -1.83
RPAP1-201ENST00000304330 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
RPAP1-201ENST00000304330 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
RPAP1-201ENST00000304330 MT3P25713 68 aa3.51□□□□□ -1.85
RPAP1-201ENST00000304330 MT1AP04731 61 aa3.49□□□□□ -1.85
RPAP1-201ENST00000304330 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
RPAP1-201ENST00000304330 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
RPAP1-201ENST00000304330 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
RPAP1-201ENST00000304330 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
RPAP1-201ENST00000304330 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
RPAP1-201ENST00000304330 PRM1P04553 51 aa3.35□□□□□ -1.87
RPAP1-201ENST00000304330 KMT2DO14686 5537 aa3.35□□□□□ -1.87
RPAP1-201ENST00000304330 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
RPAP1-201ENST00000304330 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
RPAP1-201ENST00000304330 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
RPAP1-201ENST00000304330 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
RPAP1-201ENST00000304330 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
RPAP1-201ENST00000304330 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
RPAP1-201ENST00000304330 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
RPAP1-201ENST00000304330 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
RPAP1-201ENST00000304330 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
RPAP1-201ENST00000304330 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
RPAP1-201ENST00000304330 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
RPAP1-201ENST00000304330 MT4P47944 62 aa3.14□□□□□ -1.91
RPAP1-201ENST00000304330 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
RPAP1-201ENST00000304330 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
RPAP1-201ENST00000304330 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
RPAP1-201ENST00000304330 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
RPAP1-201ENST00000304330 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
RPAP1-201ENST00000304330 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
RPAP1-201ENST00000304330 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
RPAP1-201ENST00000304330 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
RPAP1-201ENST00000304330 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
RPAP1-201ENST00000304330 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
RPAP1-201ENST00000304330 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
RPAP1-201ENST00000304330 NEBP20929 6669 aa2.67□□□□□ -1.98
RPAP1-201ENST00000304330 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
RPAP1-201ENST00000304330 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
RPAP1-201ENST00000304330 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
RPAP1-201ENST00000304330 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
RPAP1-201ENST00000304330 LCE1FQ5T754 118 aa2.54□□□□□ -2
RPAP1-201ENST00000304330 LCE1CQ5T751 118 aa2.53□□□□□ -2.01
RPAP1-201ENST00000304330 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
RPAP1-201ENST00000304330 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
RPAP1-201ENST00000304330 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
RPAP1-201ENST00000304330 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
RPAP1-201ENST00000304330 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
RPAP1-201ENST00000304330 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
RPAP1-201ENST00000304330 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
RPAP1-201ENST00000304330 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
RPAP1-201ENST00000304330 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
RPAP1-201ENST00000304330 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
RPAP1-201ENST00000304330 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
RPAP1-201ENST00000304330 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
RPAP1-201ENST00000304330 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
RPAP1-201ENST00000304330 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
RPAP1-201ENST00000304330 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
RPAP1-201ENST00000304330 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
RPAP1-201ENST00000304330 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
RPAP1-201ENST00000304330 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
RPAP1-201ENST00000304330 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
RPAP1-201ENST00000304330 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RPAP1-201ENST00000304330 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
RPAP1-201ENST00000304330 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
RPAP1-201ENST00000304330 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 98.2 ms