RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
RNF139-201ENST00000303545 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
RNF139-201ENST00000303545 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
RNF139-201ENST00000303545 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
RNF139-201ENST00000303545 MT1GP13640 62 aa6.16□□□□□ -1.42
RNF139-201ENST00000303545 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
RNF139-201ENST00000303545 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
RNF139-201ENST00000303545 MT1MQ8N339 61 aa6.13□□□□□ -1.43
RNF139-201ENST00000303545 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
RNF139-201ENST00000303545 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
RNF139-201ENST00000303545 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
RNF139-201ENST00000303545 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
RNF139-201ENST00000303545 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
RNF139-201ENST00000303545 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
RNF139-201ENST00000303545 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
RNF139-201ENST00000303545 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
RNF139-201ENST00000303545 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
RNF139-201ENST00000303545 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
RNF139-201ENST00000303545 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
RNF139-201ENST00000303545 SPRR2EP22531 72 aa5.61□□□□□ -1.51
RNF139-201ENST00000303545 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
RNF139-201ENST00000303545 SPRR2BP35325 72 aa5.61□□□□□ -1.51
RNF139-201ENST00000303545 SPRR2AP35326 72 aa5.61□□□□□ -1.51
RNF139-201ENST00000303545 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
RNF139-201ENST00000303545 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
RNF139-201ENST00000303545 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
RNF139-201ENST00000303545 MT1AP04731 61 aa5.43□□□□□ -1.54
RNF139-201ENST00000303545 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
RNF139-201ENST00000303545 SPRR2DP22532 72 aa5.36□□□□□ -1.55
RNF139-201ENST00000303545 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
RNF139-201ENST00000303545 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
RNF139-201ENST00000303545 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
RNF139-201ENST00000303545 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
RNF139-201ENST00000303545 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
RNF139-201ENST00000303545 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
RNF139-201ENST00000303545 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
RNF139-201ENST00000303545 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
RNF139-201ENST00000303545 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
RNF139-201ENST00000303545 NEBP20929 6669 aa4.95□□□□□ -1.62
RNF139-201ENST00000303545 MT3P25713 68 aa4.89□□□□□ -1.63
RNF139-201ENST00000303545 PRM1P04553 51 aa4.83□□□□□ -1.64
RNF139-201ENST00000303545 MT4P47944 62 aa4.81□□□□□ -1.64
RNF139-201ENST00000303545 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
RNF139-201ENST00000303545 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
RNF139-201ENST00000303545 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
RNF139-201ENST00000303545 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
RNF139-201ENST00000303545 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
RNF139-201ENST00000303545 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
RNF139-201ENST00000303545 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
RNF139-201ENST00000303545 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
RNF139-201ENST00000303545 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
RNF139-201ENST00000303545 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
RNF139-201ENST00000303545 MUC5ACP98088 5654 aa4.21□□□□□ -1.73
RNF139-201ENST00000303545 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
RNF139-201ENST00000303545 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
RNF139-201ENST00000303545 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
RNF139-201ENST00000303545 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
RNF139-201ENST00000303545 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
RNF139-201ENST00000303545 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
RNF139-201ENST00000303545 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
RNF139-201ENST00000303545 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
RNF139-201ENST00000303545 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
RNF139-201ENST00000303545 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
RNF139-201ENST00000303545 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
RNF139-201ENST00000303545 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
RNF139-201ENST00000303545 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
RNF139-201ENST00000303545 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
RNF139-201ENST00000303545 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
RNF139-201ENST00000303545 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
RNF139-201ENST00000303545 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
RNF139-201ENST00000303545 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
RNF139-201ENST00000303545 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
RNF139-201ENST00000303545 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
RNF139-201ENST00000303545 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
RNF139-201ENST00000303545 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
RNF139-201ENST00000303545 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
RNF139-201ENST00000303545 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 32.2 ms