RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
TRABD-201ENST00000303434 MT1EP04732 61 aa6.34□□□□□ -1.39
TRABD-201ENST00000303434 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
TRABD-201ENST00000303434 MT1LQ93083 61 aa6.33□□□□□ -1.4
TRABD-201ENST00000303434 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.41
TRABD-201ENST00000303434 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
TRABD-201ENST00000303434 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
TRABD-201ENST00000303434 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
TRABD-201ENST00000303434 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
TRABD-201ENST00000303434 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
TRABD-201ENST00000303434 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
TRABD-201ENST00000303434 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
TRABD-201ENST00000303434 MT1GP13640 62 aa5.94□□□□□ -1.46
TRABD-201ENST00000303434 MT1MQ8N339 61 aa5.93□□□□□ -1.46
TRABD-201ENST00000303434 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
TRABD-201ENST00000303434 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
TRABD-201ENST00000303434 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
TRABD-201ENST00000303434 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
TRABD-201ENST00000303434 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
TRABD-201ENST00000303434 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
TRABD-201ENST00000303434 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
TRABD-201ENST00000303434 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
TRABD-201ENST00000303434 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
TRABD-201ENST00000303434 SPRR2EP22531 72 aa5.54□□□□□ -1.52
TRABD-201ENST00000303434 SPRR2BP35325 72 aa5.54□□□□□ -1.52
TRABD-201ENST00000303434 SPRR2AP35326 72 aa5.54□□□□□ -1.52
TRABD-201ENST00000303434 PRM1P04553 51 aa5.5□□□□□ -1.53
TRABD-201ENST00000303434 MT1AP04731 61 aa5.48□□□□□ -1.53
TRABD-201ENST00000303434 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
TRABD-201ENST00000303434 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
TRABD-201ENST00000303434 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
TRABD-201ENST00000303434 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
TRABD-201ENST00000303434 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
TRABD-201ENST00000303434 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
TRABD-201ENST00000303434 NEBP20929 6669 aa5.37□□□□□ -1.55
TRABD-201ENST00000303434 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
TRABD-201ENST00000303434 SPRR2DP22532 72 aa5.34□□□□□ -1.55
TRABD-201ENST00000303434 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
TRABD-201ENST00000303434 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
TRABD-201ENST00000303434 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
TRABD-201ENST00000303434 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
TRABD-201ENST00000303434 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
TRABD-201ENST00000303434 MT3P25713 68 aa4.79□□□□□ -1.64
TRABD-201ENST00000303434 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
TRABD-201ENST00000303434 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
TRABD-201ENST00000303434 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
TRABD-201ENST00000303434 MT4P47944 62 aa4.66□□□□□ -1.66
TRABD-201ENST00000303434 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
TRABD-201ENST00000303434 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
TRABD-201ENST00000303434 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
TRABD-201ENST00000303434 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
TRABD-201ENST00000303434 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
TRABD-201ENST00000303434 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
TRABD-201ENST00000303434 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
TRABD-201ENST00000303434 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
TRABD-201ENST00000303434 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
TRABD-201ENST00000303434 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
TRABD-201ENST00000303434 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
TRABD-201ENST00000303434 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.77
TRABD-201ENST00000303434 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.78
TRABD-201ENST00000303434 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
TRABD-201ENST00000303434 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
TRABD-201ENST00000303434 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
TRABD-201ENST00000303434 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
TRABD-201ENST00000303434 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
TRABD-201ENST00000303434 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
TRABD-201ENST00000303434 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
TRABD-201ENST00000303434 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
TRABD-201ENST00000303434 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TRABD-201ENST00000303434 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
TRABD-201ENST00000303434 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
TRABD-201ENST00000303434 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
TRABD-201ENST00000303434 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
TRABD-201ENST00000303434 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TRABD-201ENST00000303434 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
TRABD-201ENST00000303434 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
TRABD-201ENST00000303434 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 89.3 ms