RNA–Protein interactions for RNA: ENST00000302909.3

KCNK3-201, Transcript of potassium two pore domain channel subfamily K member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK3, Length 6,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK3-201ENST00000302909 KIAA1109Q2LD37 5005 aa5.12□□□□□ -1.59
KCNK3-201ENST00000302909 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
KCNK3-201ENST00000302909 MT1MQ8N339 61 aa5.1□□□□□ -1.59
KCNK3-201ENST00000302909 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
KCNK3-201ENST00000302909 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
KCNK3-201ENST00000302909 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
KCNK3-201ENST00000302909 MT4P47944 62 aa4.92□□□□□ -1.62
KCNK3-201ENST00000302909 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
KCNK3-201ENST00000302909 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
KCNK3-201ENST00000302909 MT3P25713 68 aa4.87□□□□□ -1.63
KCNK3-201ENST00000302909 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
KCNK3-201ENST00000302909 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
KCNK3-201ENST00000302909 PCLOQ9Y6V0 5065 aa4.85□□□□□ -1.63
KCNK3-201ENST00000302909 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
KCNK3-201ENST00000302909 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
KCNK3-201ENST00000302909 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
KCNK3-201ENST00000302909 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
KCNK3-201ENST00000302909 MT1AP04731 61 aa4.68□□□□□ -1.66
KCNK3-201ENST00000302909 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
KCNK3-201ENST00000302909 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
KCNK3-201ENST00000302909 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
KCNK3-201ENST00000302909 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
KCNK3-201ENST00000302909 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
KCNK3-201ENST00000302909 MUC2Q02817 5179 aa4.46□□□□□ -1.7
KCNK3-201ENST00000302909 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
KCNK3-201ENST00000302909 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
KCNK3-201ENST00000302909 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
KCNK3-201ENST00000302909 KMT2DO14686 5537 aa4.39□□□□□ -1.71
KCNK3-201ENST00000302909 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
KCNK3-201ENST00000302909 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
KCNK3-201ENST00000302909 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
KCNK3-201ENST00000302909 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
KCNK3-201ENST00000302909 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
KCNK3-201ENST00000302909 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
KCNK3-201ENST00000302909 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
KCNK3-201ENST00000302909 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
KCNK3-201ENST00000302909 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
KCNK3-201ENST00000302909 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
KCNK3-201ENST00000302909 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
KCNK3-201ENST00000302909 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
KCNK3-201ENST00000302909 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
KCNK3-201ENST00000302909 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
KCNK3-201ENST00000302909 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
KCNK3-201ENST00000302909 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
KCNK3-201ENST00000302909 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
KCNK3-201ENST00000302909 USH2AO75445 5202 aa3.81□□□□□ -1.8
KCNK3-201ENST00000302909 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
KCNK3-201ENST00000302909 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
KCNK3-201ENST00000302909 NEBP20929 6669 aa3.64□□□□□ -1.83
KCNK3-201ENST00000302909 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
KCNK3-201ENST00000302909 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
KCNK3-201ENST00000302909 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
KCNK3-201ENST00000302909 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
KCNK3-201ENST00000302909 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
KCNK3-201ENST00000302909 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
KCNK3-201ENST00000302909 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
KCNK3-201ENST00000302909 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
KCNK3-201ENST00000302909 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
KCNK3-201ENST00000302909 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
KCNK3-201ENST00000302909 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
KCNK3-201ENST00000302909 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
KCNK3-201ENST00000302909 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
KCNK3-201ENST00000302909 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
KCNK3-201ENST00000302909 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
KCNK3-201ENST00000302909 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
KCNK3-201ENST00000302909 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
KCNK3-201ENST00000302909 PHGR1C9JFL3 82 aa2.56□□□□□ -2
KCNK3-201ENST00000302909 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
KCNK3-201ENST00000302909 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
KCNK3-201ENST00000302909 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
KCNK3-201ENST00000302909 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
KCNK3-201ENST00000302909 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
KCNK3-201ENST00000302909 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
KCNK3-201ENST00000302909 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
KCNK3-201ENST00000302909 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
KCNK3-201ENST00000302909 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
KCNK3-201ENST00000302909 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms