RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 MT1XP80297 61 aa5.34□□□□□ -1.55
KARS-201ENST00000302445 MT1BP07438 61 aa5.3□□□□□ -1.56
KARS-201ENST00000302445 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
KARS-201ENST00000302445 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
KARS-201ENST00000302445 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
KARS-201ENST00000302445 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
KARS-201ENST00000302445 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
KARS-201ENST00000302445 MT3P25713 68 aa5.08□□□□□ -1.6
KARS-201ENST00000302445 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
KARS-201ENST00000302445 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
KARS-201ENST00000302445 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
KARS-201ENST00000302445 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
KARS-201ENST00000302445 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
KARS-201ENST00000302445 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
KARS-201ENST00000302445 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
KARS-201ENST00000302445 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
KARS-201ENST00000302445 USH2AO75445 5202 aa4.86□□□□□ -1.63
KARS-201ENST00000302445 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
KARS-201ENST00000302445 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
KARS-201ENST00000302445 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
KARS-201ENST00000302445 MT1LQ93083 61 aa4.66□□□□□ -1.66
KARS-201ENST00000302445 MT1EP04732 61 aa4.61□□□□□ -1.67
KARS-201ENST00000302445 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
KARS-201ENST00000302445 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
KARS-201ENST00000302445 KMT2DO14686 5537 aa4.5□□□□□ -1.69
KARS-201ENST00000302445 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
KARS-201ENST00000302445 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
KARS-201ENST00000302445 MT1GP13640 62 aa4.29□□□□□ -1.72
KARS-201ENST00000302445 MT1MQ8N339 61 aa4.28□□□□□ -1.72
KARS-201ENST00000302445 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.73
KARS-201ENST00000302445 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
KARS-201ENST00000302445 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
KARS-201ENST00000302445 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
KARS-201ENST00000302445 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
KARS-201ENST00000302445 MT1AP04731 61 aa4.2□□□□□ -1.74
KARS-201ENST00000302445 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
KARS-201ENST00000302445 NEBP20929 6669 aa4.16□□□□□ -1.74
KARS-201ENST00000302445 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
KARS-201ENST00000302445 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
KARS-201ENST00000302445 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
KARS-201ENST00000302445 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
KARS-201ENST00000302445 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
KARS-201ENST00000302445 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
KARS-201ENST00000302445 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
KARS-201ENST00000302445 PRM1P04553 51 aa3.93□□□□□ -1.78
KARS-201ENST00000302445 SPRR2EP22531 72 aa3.92□□□□□ -1.78
KARS-201ENST00000302445 SPRR2BP35325 72 aa3.92□□□□□ -1.78
KARS-201ENST00000302445 SPRR2AP35326 72 aa3.92□□□□□ -1.78
KARS-201ENST00000302445 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
KARS-201ENST00000302445 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
KARS-201ENST00000302445 SPRR2DP22532 72 aa3.78□□□□□ -1.8
KARS-201ENST00000302445 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
KARS-201ENST00000302445 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.81
KARS-201ENST00000302445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
KARS-201ENST00000302445 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
KARS-201ENST00000302445 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
KARS-201ENST00000302445 MT4P47944 62 aa3.37□□□□□ -1.87
KARS-201ENST00000302445 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
KARS-201ENST00000302445 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
KARS-201ENST00000302445 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
KARS-201ENST00000302445 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
KARS-201ENST00000302445 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
KARS-201ENST00000302445 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
KARS-201ENST00000302445 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
KARS-201ENST00000302445 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
KARS-201ENST00000302445 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
KARS-201ENST00000302445 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
KARS-201ENST00000302445 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
KARS-201ENST00000302445 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
KARS-201ENST00000302445 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
KARS-201ENST00000302445 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
KARS-201ENST00000302445 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
KARS-201ENST00000302445 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
KARS-201ENST00000302445 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
KARS-201ENST00000302445 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
KARS-201ENST00000302445 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
KARS-201ENST00000302445 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 212.3 ms